| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1909 |
|---|
| Symbol | |
|---|
| ID | 5078529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 2187050 |
|---|
| End bp | 2188441 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640499070 |
|---|
| Product | sodium/sulphate symporter |
|---|
| Protein accession | YP_001183431 |
|---|
| Protein GI | 146293007 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGTG TCAATAGCGT AAAAAAAATA GCCTTTACTA GTGCATTATT CATCGCCATC
TTGTTGGCCG TTTTTCCTCT AAGTGAGTAT CCGACGATAT TTTCCTATAG TGCTGGCGTA
GTATTAGTGA CACTGATGTT TTGGAGCACA GGCTTCTTTC CCCCTTTTAT GGCAGGTCTG
ATCTTTTTTG CTCTCGCGAC CATTTTTAAC CTTATCGAAC CAAGTCTGCT TTTTTCTGGG
TTTGGTTCGA CTGCGGTGTG GTTAATCATT TCTGGTTTTG TGATAGGCAG TGCCATTTCA
GAATCAGGGT TAAGCCGCAG AATGGCCTCA CTACTTTCAC CCATGCTCAC TAGCCGTTAT
CTCTACTTGA TTGCAGGCCT TGTCCTGAGT GCAGTACTAC TTGGTTTTGT TATGCCATCA
TCCGTCGGCC GTGCGGTTGT GCTTGTGCCA ATTGGCATGG CTTTAGCCGA GCAAGTTGGG
TTTGAGCGAG GCAGTAATGG ACGTATGGGT ATTGCAACGG CCTTAGCACT GTCTTGTAAT
ATGCCAAGTT TTGCAGTGTT ACCATCTAAT ATTCCGAATA TGATCTTGGC AGGTTCCAGT
GAACGCCTCT TTAACATCAA TTTTGGTTAT ACTGAGTATC TCTTGCTGCA TTTTCCAATC
TTAGGTTTGC TCAAGTCGAT TTTAATAATT ACGTTGGTGG TGTATTTCTT TCCTGCACAT
ATTGATAAAA AGTGGCGTAG TAAAGAGAAA GAAAATGAAA CTTATGATCT AGCCATGCAA
AGGAAAGTCG CGGTAGTACT GTGCATCACC CTACTGTTTT GGGTAACAGA CACACTACAT
GGTATTAATC CTGCTTGGGT TGGACTTGCA ACGGCAATCA TTCTGTTATT GCCCAAATGG
GGCGTATTAG AACCTAAGCG TTTTAATAGC GCTGTCGATT TTGCTACCGT TATTTTTGTT
GCTGCAGCAT TAGGACTTGG CACATTGGTC AATCACTCTG GGCTTGGAAC TGCACTAGGA
CAAGTGTTTA GTGAATGGCT ACCCTTACAA CAGGGTGAAT CGTTCCTGAA TTTTATGTCC
TTATCATTAA TCTCTACACT AACGGGTTTA GTTGCCACGG TTCCGGGTGT ACCCACTGTA
CTATCTCCTA TGGCAGCGGA CTTTGCCGAT GCGACTGGTT TCTCTATTCC TGCGGTATTA
ATGACCCAAG TGCTCGGTTT CTCAACGGTG ATTTTTCCTT ATCAAGTTGC TCCCTTAATT
CTAGCCATGC AACTCTCTCA GGAACCATTA GCAAAATTAC TCAAAATCAC CTTACCTTTA
GCAATAATAA CGATAGTCGT ACTGATGCCA ATGGACTATC TATGGTGGTT GTGGCTCGGT
TGGATAGCCT AG
|
|---|
| Protein sequence | MKSVNSVKKI AFTSALFIAI LLAVFPLSEY PTIFSYSAGV VLVTLMFWST GFFPPFMAGL
IFFALATIFN LIEPSLLFSG FGSTAVWLII SGFVIGSAIS ESGLSRRMAS LLSPMLTSRY
LYLIAGLVLS AVLLGFVMPS SVGRAVVLVP IGMALAEQVG FERGSNGRMG IATALALSCN
MPSFAVLPSN IPNMILAGSS ERLFNINFGY TEYLLLHFPI LGLLKSILII TLVVYFFPAH
IDKKWRSKEK ENETYDLAMQ RKVAVVLCIT LLFWVTDTLH GINPAWVGLA TAIILLLPKW
GVLEPKRFNS AVDFATVIFV AAALGLGTLV NHSGLGTALG QVFSEWLPLQ QGESFLNFMS
LSLISTLTGL VATVPGVPTV LSPMAADFAD ATGFSIPAVL MTQVLGFSTV IFPYQVAPLI
LAMQLSQEPL AKLLKITLPL AIITIVVLMP MDYLWWLWLG WIA
|
|---|
| |