| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1820 |
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| Symbol | |
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| ID | 5079187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 2071093 |
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| End bp | 2074029 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640498970 |
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| Product | DEAD-like helicases-like protein |
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| Protein accession | YP_001183342 |
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| Protein GI | 146292918 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTGA CATTCATCAG TCAGTGCGAG AAAAATGCCC TCAAAAAGAC CCGCCGCGTG
CTGGATGCTT TTGCTAACCG CATAGGCGAT AACACTTGGC AAACCCTGAT CACCGAAGAT
GGACTATTAA CGGTTAAGAA AATGCTCAAA CAAACCGCCA GTAAAAGTAC GGCGGTGAGT
TGTCACTGGA TCCGTTCGCG CGCCAGAAGC CAATTACTTT GGGTCGTAGG AAATCGATTG
AAATTTAATG AACAAGGCAT AGTGCCAGTG AATAGTACAG TTAAAGAGGT TTTTATGGAT
GTTGTAACAA ACAAACCCAA GCAAGGTGTG TTGTATGCCA ACACCCAATT ACAGCCACTG
AGTGAGCATT TATTTGCGGT TGGATTTGTT GCCGAACTAC TGCACCGTCA GTTATTTCCA
GAGAATACAC AGTTTTCAAT TGCGAATTTT ATTGCAGGTT GCTTGCATGA TTTAGGGAAA
ATTGACCCAA AGTTTCAAGA ATGGGTGACT AATCCAAAAA AGAGGGACTT CATAGCCGAA
GATGGCCAAC ACATTGATGA TGCTAAATTT AGTTTTGATA AACATCCAAG GCATAATGAA
GTGTCGCTGT TACTCTATCA ATTGCTTGAT AGTACAGAAC TTAAATTACT AAACCCAAGT
AATAAACGTT CAGTAAAGCA TGCGTTGTAC TGGCATCATG CTAAGCCATT TCGTAAAGAA
AAGAATGGTT TTGATACCTA TAAAGACATC AGCAAAAAGC TAGTGGCAAA TCAAAAAGAG
ATAGGCCTAT CTGATATTGT AGGTCAAGCT CAAACACTGC TTAGGCAGGT TATCGGAATC
GATAAAAAGT ACCGTGAGTT AACGAATCGT CTTCTTGAAA AAGCCTTCTT AGCTGAAGTT
GAACAGGATC TAGAGGCGAA TCTGCCCGAT GCACCAGCCT TACCCAGTTA CAAAGAATAT
GAATTTGAAG AGTCGGTATC GGCCAATAGC ACCAATGTGA AACTCAATGC ACTAAACAAC
ATAGTACGTG CTTGTTTGAT CTCAGCTGAT CGTACCGTAT CGGCATTGAG CGCAGCAGAG
CTACACACTG CTATTTTTGA GCGCCAGTTA GAAGAAATAG TTACCGAGCT ATTAGAAGTG
GAAACGACAC TTAGTTCTGA TATTGACACT TGCCTAAACG CCTTTTTTCC TACGAGTGAG
CGCAGTCAAA AACAAAGGGA TATTGCCAAG CAGTTAACCA CCGCCGAAGA TGTCGCGGTG
CTCGCGGGGG CTGCAGGCTG TGGTAAAACC AAAATCGCCT TAGAGTGGGC CAAATTGCAG
GGCGTAAAAC GGATTATTTG GGTTTGCCCC CGGGTACAAG TCTGCCAAGG TTTGTTTTAT
GAGCTAACGT CAGAGCAATA TCTTCCTAAT AGCACCATTG AAATTAATAC TGGTGAATTT
AAATTCCACA ATCAATGGGA TAACCCTATT CCTGATGATG AAAACTTTTC CGGCGATATA
GTGCTCACCA CCATAGATCA AATTCTTGGT TCAGTGATCA GTCACACGAA AGCTAATACG
CTTATCGATT TTTTAAATGT GCATGTAGTG TTTGATGAGT TCCATGAATA CGTCAACATG
CCAGCTTTTA ATTTGCTGTT TGCTGAACTC ATTGCGGCAA AAAAAATGCA AAAAGATCAA
GCTAAGACCT TATTGGTGTC GGCAACACCT CACTATGTCT TTGTAGAAGA TTTACTCGGT
ATTCACCCTG ATGATATTAA AATCATGCCA TCGTTTAACC CAAGCCAGTA TCAACTCGAT
TTTAAAATCT TTGATGATAC TAATCTAAGC AATATAAACC CGCTCTTTGC ACAACAGAGT
GGCTGTACTT TTGTTATCAG TAACATGGCG CTGACGGCGC AAAACAGTTT TATTGTAAAT
CAGCACAACG AAAATGCGGT GTTATTGCAT TCCAAATTTA TTAAAAGTGA TAAACGTAAA
TGGTTTGGTG AAGTGTACGA GGCTTACAAG CGCGATGGCA CACGCAAATA TGAAGTACTA
CGCAGTGGTC CGATTGTACA AGCATCGCTC AATATCAGTT GTGATTACAT GGTGGCCGAA
ATCACCAGTG CTGAAGATTG TTTACAGCGT TTGGGTCGTT TAGATCGTTT TGGAGAAAAT
AGTGACGTGA ACACTTATAC CTTAGCTGTT CCAGAGTCCA TAGCCAATGG CAAAGGTAAG
AGTCCAGCCG CTGGCTTTTT ATCAAAAATG TATGCGTTGA GTTCAGTTCG GGCCTGGTAT
CAGTTTTTAC ATAGTGAATT GGCAGACAAG ACCTTTACTT TGCCAGAGAT TTATCAACTT
TATTTCGCCT TTCATCACAC TGAACGTAAT CGAGGGTTTA TTGCAAGTGA CTTAGTGGCC
GCGCTCAAAA ATAGTGTGCA ACAAATCAAC GCAAAAGTGG TAGATCCTAT TACCGTTCCA
CCAAAGAACA ACAAAGATAA AAAACGCACC AAGATCAGCA AAGGATCACT GCGCGGTGAT
AATCGCTTTG TACAATTGGC TGTGGTGGAT TTAAGTCAAG CTGAGCCGAA ATATATTGAA
GCCTACGCTT ATTCGATTCC ACTGGATGAT GACAGTAATA TCGACAATCT CACATACGCC
ACCAAGGCTA TTTGTGGTTA TGACCAAAGC GATAAAGATT TACTATCCCA CATGTTTAAA
AAACATCACA ACATTATGGG TGGCACGGGT AAGGCTTTCA CCGATAAGAT TTTACTCAAT
GAAGCGCGCG ACCCAGAGTC ACCGATTTAT TTGAGTTACA CCACTAACGA TTTACTGCAA
GTGGGTGGCG AAAGTGCTCG TCATCCTCAT GCCATTTATT ACGCCGTGTG CGACAAACAA
GCCATCGGTG CTATGTCCAT TAAACAAATT AATCAAACCA CTGAAGATGA GGAATAA
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| Protein sequence | MMVTFISQCE KNALKKTRRV LDAFANRIGD NTWQTLITED GLLTVKKMLK QTASKSTAVS
CHWIRSRARS QLLWVVGNRL KFNEQGIVPV NSTVKEVFMD VVTNKPKQGV LYANTQLQPL
SEHLFAVGFV AELLHRQLFP ENTQFSIANF IAGCLHDLGK IDPKFQEWVT NPKKRDFIAE
DGQHIDDAKF SFDKHPRHNE VSLLLYQLLD STELKLLNPS NKRSVKHALY WHHAKPFRKE
KNGFDTYKDI SKKLVANQKE IGLSDIVGQA QTLLRQVIGI DKKYRELTNR LLEKAFLAEV
EQDLEANLPD APALPSYKEY EFEESVSANS TNVKLNALNN IVRACLISAD RTVSALSAAE
LHTAIFERQL EEIVTELLEV ETTLSSDIDT CLNAFFPTSE RSQKQRDIAK QLTTAEDVAV
LAGAAGCGKT KIALEWAKLQ GVKRIIWVCP RVQVCQGLFY ELTSEQYLPN STIEINTGEF
KFHNQWDNPI PDDENFSGDI VLTTIDQILG SVISHTKANT LIDFLNVHVV FDEFHEYVNM
PAFNLLFAEL IAAKKMQKDQ AKTLLVSATP HYVFVEDLLG IHPDDIKIMP SFNPSQYQLD
FKIFDDTNLS NINPLFAQQS GCTFVISNMA LTAQNSFIVN QHNENAVLLH SKFIKSDKRK
WFGEVYEAYK RDGTRKYEVL RSGPIVQASL NISCDYMVAE ITSAEDCLQR LGRLDRFGEN
SDVNTYTLAV PESIANGKGK SPAAGFLSKM YALSSVRAWY QFLHSELADK TFTLPEIYQL
YFAFHHTERN RGFIASDLVA ALKNSVQQIN AKVVDPITVP PKNNKDKKRT KISKGSLRGD
NRFVQLAVVD LSQAEPKYIE AYAYSIPLDD DSNIDNLTYA TKAICGYDQS DKDLLSHMFK
KHHNIMGGTG KAFTDKILLN EARDPESPIY LSYTTNDLLQ VGGESARHPH AIYYAVCDKQ
AIGAMSIKQI NQTTEDEE
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