| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1784 |
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| Symbol | |
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| ID | 5079245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 2030112 |
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| End bp | 2030939 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640498935 |
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| Product | transport-associated |
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| Protein accession | YP_001183308 |
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| Protein GI | 146292884 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0010501 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAT CGTATCGCAA ATTTATTTTT ACCTTAGCCA TCTTACTCAC CCTGTCACCA
CTACAGTCAG CATCAGCCGC TGATACGGCA ACGAAAGCAA TGGATGATGT ACGCCAAGAA
AGCCAAATTG CAACAAGTTA TGCCCTCAAC CCCTATTTAC GCGCTAATGA TCTAAAAGTC
ACAGTACAAA AAGGTAAAGC AGTGTTGACA GGTCAAGTGG ACGAAAAAAT TAGCAAAGAA
CTCGCGGGTG AAATCGCTCA GGGCGTATCA GGTATTAAAG ATGTTGATAA CCAGATAGTC
GTTGACGCTA ATTACATGCC GAAAGCTAAC TCAAATGGTT TTGGTGACAA AATTGATGAT
GCCAATATCT CGGCCGCTAT TCGCTCTAAA TTGCAATGGA ATAAAGATGT CGATGACGTC
GGCACAGAAG TCATGACTAA ATCCGGACGA GTCACGCTAA ATGGCACTGT AAACAACCAG
AATGCAAAAG ACATTACTCA TCGATTGGCA CTCAATACTC GCGGCGTAAA ATCAGTCACC
AATAATTTGA AAATTCAAAG CGCAACGGTA AGCAAAGACG AAAAAGCAAA ACTGAAAAAT
GAAACAGAAA GTCACAATAT TTCAGATAGT TGGATAACAG CCAAAGTAAA ATCCAGCTTT
ATGTATTCAA GCAATATTAA TGGCTCTGAC ATTGATGTCA GCACCAATAA CGGCATAGTA
ACACTGACAG GTAAAGTTGC CAGCGGCAGT GAACAATCAT TAGCTGTTGA AACAGCACAG
AATATCCGTG GTGTTAAAAG TGTCACATCC AAAGCATTAA CATTCTAA
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| Protein sequence | MNLSYRKFIF TLAILLTLSP LQSASAADTA TKAMDDVRQE SQIATSYALN PYLRANDLKV
TVQKGKAVLT GQVDEKISKE LAGEIAQGVS GIKDVDNQIV VDANYMPKAN SNGFGDKIDD
ANISAAIRSK LQWNKDVDDV GTEVMTKSGR VTLNGTVNNQ NAKDITHRLA LNTRGVKSVT
NNLKIQSATV SKDEKAKLKN ETESHNISDS WITAKVKSSF MYSSNINGSD IDVSTNNGIV
TLTGKVASGS EQSLAVETAQ NIRGVKSVTS KALTF
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