Gene Sputcn32_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1606 
Symbol 
ID5079422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1829038 
End bp1830027 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content47% 
IMG OID640498739 
ProductTolA family protein 
Protein accessionYP_001183130 
Protein GI146292706 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID[TIGR02794] TolA protein 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.000000895247 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGATA ATTCAAATGT TGCATTACCT CTGTCAATTT CAGCAGGTAT TCATATTGGT 
GTGATAATTA TTTTAGCGAT TGGCGTTGAC TTCACCCATA AACCTGAACC CGTGCAACAA 
GTTAGCGCCC CTGCGGTAAA AGCTGTTATG GTTGATCAGC AGAAAGTCGC TAATCAGGTT 
GAAAAGATTA AGCAAGAAAA ACGTGAAGCT GAACGGCGTG AACAAGAACG CCAAGCTGAG 
CTTGAACGCA AAGCGCAAGA GGCAAAGCAA GCACGTGAAC GTGAACAAGC ACAGCTTAAA 
AAGTTGGAGC AAGAACGTAA ACTGCAAGAG ATTGAAACCC AAAAGGCTAA CGAAGCTGCC 
AAAGTTGCAC AGGTGAAACA GCAACAGGAA AAGGAAAAGG CACAGAAAGC CGAAGCCGAC 
CGTAAGCTGA AAGAGCAAGA GCGTAAAGTG GCTGAAGAAG CGGCCCAAAA AGCAGCGGAA 
AAGCGTAAAG CAGAAGAAGC CGCTGCGGCG AAGGCCGAAA CTGAGCGTAA GCAAAAAGAA 
GAGGCCGAAC GCAAAAAGAA AGAAGAAGCT GATCGTAAAC TGAAGGAAGA AGCTGAACGT 
AAACGTAAAG CTGATGCAGA AGCCAAGGCT CGAGCACAGC AAGAGCAGGA AATGGCCGAT 
GCGTTAGCCG CAGAGCAGGC GGCGTTGTCG CAAACGATGA ATAAGCAGAT GCAGAGCGAG 
GTCGGTAAAT ATACCGCCAT GATCAAGTCG ACTATTCAAC GCAATCTGGT TGTTGATGAG 
TCAATGCGAG GAAAGAGTTG TAAAGTGTCT GTGCGTTTAG CTAACGATGG ATTTGTGATC 
AGTAGCCAAA CAGATGGCGG CGATGCAAAT GTTTGTCGGG CGACTAAAGC GGCGATTTTG 
AAGGCGGGTA AACTGCCTGT CTCTCCGGAT CCTGCGGTTT ATAACTTGAT GAAAGAAATT 
AACTTAATCG TTGAACCAAC GTTTAATTAA
 
Protein sequence
MADNSNVALP LSISAGIHIG VIIILAIGVD FTHKPEPVQQ VSAPAVKAVM VDQQKVANQV 
EKIKQEKREA ERREQERQAE LERKAQEAKQ AREREQAQLK KLEQERKLQE IETQKANEAA 
KVAQVKQQQE KEKAQKAEAD RKLKEQERKV AEEAAQKAAE KRKAEEAAAA KAETERKQKE 
EAERKKKEEA DRKLKEEAER KRKADAEAKA RAQQEQEMAD ALAAEQAALS QTMNKQMQSE 
VGKYTAMIKS TIQRNLVVDE SMRGKSCKVS VRLANDGFVI SSQTDGGDAN VCRATKAAIL 
KAGKLPVSPD PAVYNLMKEI NLIVEPTFN