| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1568 |
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| Symbol | |
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| ID | 5079528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1784679 |
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| End bp | 1785569 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640498701 |
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| Product | cytidine deaminase |
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| Protein accession | YP_001183092 |
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| Protein GI | 146292668 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.635046 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGATA GATTCATTCG CAGCATAACC CAGCTGCCGC TGCCGTTAGC TGATGCACTT
ATTCCCCTAT TACATCAAAA CTTTGCAGGC CACATTGATG CAATGCAACT TGCCAAATTA
ACCCTCGCCA GCAAAATGAC TGAGGCAGAG GTACTACTCG CACTATTACC TATTGCTGCA
GCACTGGCAA AGCCGCCAAT AAGCGAGTTT TATGTGGGCG CTATCGCCAA GGGGAAAAGT
GGTGATATTT ACATGGGAGC AAACTTAGAA CTTCCCGGTG AGGCCTTATT CCATTCCGTA
CATGCAGAGC AAAGTGCGAT TAGTCATGCT TGGTTAAGTG GTGAGAGTCA AATTGTTGAT
ATAATTGTCA ATGCTAGCCC CTGTGGTCAT TGTCGGCAAT TTATGAATGA GCTGGTTGAT
GGCGCCAACA TTACAATTCA TCTACCTGCA CAGGAAAGCC ATTCACTTGC TTATTATCTC
CCCTATGCAT TTGGTCCGAA AGATTTAAAT GTCGTCTCAC CGCTGCTTGC AAAACAGCAA
ACTGAGTTTG TGCTAGATAG CAGTGACCCC ATGATTATTG AAGGTTTAGA TCATGCTGGT
TTAAGTTATG CCCCGTATAC TCAAAGCTTT GCCGCTGTGG TACTAGAAAC CCATGATGGC
GCGACCTACT GCGGACGCTA TGCCGAAAAT GCGGCCTTTA ATCCTTCAAT GTTGCCGATG
CAAATGGCAC TGTCAAATTT AACTCGGCAC AACCGAGAAT TTAGCGACAT TCGTCGTGCG
GTATTGATTG AATCATCTCA GGGGAAAATC AGTTTAGTTG GAGCAACGAT GGATGCGCTA
CATACAATAG CGGCTGTTGA ACTAGAACAT ATTGTTGTCG ATCCCGTCTA A
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| Protein sequence | MQDRFIRSIT QLPLPLADAL IPLLHQNFAG HIDAMQLAKL TLASKMTEAE VLLALLPIAA
ALAKPPISEF YVGAIAKGKS GDIYMGANLE LPGEALFHSV HAEQSAISHA WLSGESQIVD
IIVNASPCGH CRQFMNELVD GANITIHLPA QESHSLAYYL PYAFGPKDLN VVSPLLAKQQ
TEFVLDSSDP MIIEGLDHAG LSYAPYTQSF AAVVLETHDG ATYCGRYAEN AAFNPSMLPM
QMALSNLTRH NREFSDIRRA VLIESSQGKI SLVGATMDAL HTIAAVELEH IVVDPV
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