Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1510 |
Symbol | |
ID | 5079569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 1722960 |
End bp | 1723664 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640498643 |
Product | hypothetical protein |
Protein accession | YP_001183034 |
Protein GI | 146292610 |
COG category | [S] Function unknown |
COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC TTTTACCAAT CAGCAGCCTG CTAATATTAC TCGGTTCAAC CTCTGCCCTT GCTGCAGATA TTAATATCCC CATGTCATTC GAATACATTG CACTCGATGG TAAAAAAGTT GAATCCAGCC TGTTCAATCA CAAAAGCAGC TTAGCATTAA CGCCAGGCAC ACATAAAATA GCTATTCGCT ACCATGAAAT GATTGAAGAT CAATTCAGCG ATAGTCAAAG CTTTGTAAAA TCATCTCCTT TTATTGTCAC CCTAGAAGTC GATGGGGATC ATCAATACTA CCTTCAACCT GCTGAAGGAA AAATTGTTAA AAAGCCTAAA GTTTTTGCCC AAAACCCACA GATTCTATTA ACCCGTGGCG ACAAAGGGCA AGTTAATTAC CAAGTGACTA ATACCAATAT TGAAGAAGAA AGTTTTGTTT CTCGTCTATT TAGTGGAAAC CAAGCTGTTG ATGTATCAAG TACCGCAGTT CAAGCAACGG GAGCGGCAGG GACTGCAACT GTTACTACGC CAACACCGCC CCCAACATCG GCTCAAGCCG CTGTAATTGC AACCTCATTA ACATCCACAA TGCCTACCGA TGATGCATCA AAGGTGACTG GAGCAAATCC GCAGCAGATG CTGCAATACT GGTGGTTACA AGCTGATGAA AAAACACGTA AAGAATTTAT GAGTTGGGCA ATTTCACAAC TCTAA
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Protein sequence | MKLLLPISSL LILLGSTSAL AADINIPMSF EYIALDGKKV ESSLFNHKSS LALTPGTHKI AIRYHEMIED QFSDSQSFVK SSPFIVTLEV DGDHQYYLQP AEGKIVKKPK VFAQNPQILL TRGDKGQVNY QVTNTNIEEE SFVSRLFSGN QAVDVSSTAV QATGAAGTAT VTTPTPPPTS AQAAVIATSL TSTMPTDDAS KVTGANPQQM LQYWWLQADE KTRKEFMSWA ISQL
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