Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1378 |
Symbol | |
ID | 5080573 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1564622 |
End bp | 1565065 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640498509 |
Product | IS91 family transposase |
Protein accession | YP_001182904 |
Protein GI | 146292480 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGGCC AGATTTTTTC AGTGGAATAC CTTGGGCGTT ATACCCGTAA AGGCATGCTG CATGAGTCAA GAATTGCCGA TGTCACCGCA GAGCATGTCA GTTTTCGCTA CAAAGACTAT CGTGATGGTC AGCAGCATAA GCAAATGCGG CTAAGCTGTG ATGAGTTTAT CCGCCGTTAC TTATTGCATG TGTTGCCCAA AGGGTTATTG CGAGTCAGGC ACTTTGGCTT TTTAGCCAAC GCTTGCCGCT GCAAAAAGCT GGCGCTCATC CAGCAGCAAT TAGGCAAGCC GCAGGTGGTA TTGGTGAGTC CTTTAGTTAA GGAGGACTGT TCGTGGTCAT GCCCGCAATG TCTGTTAGGT CATTTGCAGT TTATTGGGCT GATAAGACCG CAGTCGGTAG TGATGATAAA CTGCCAAGGT CAGCCAGTAC GTATGTCAGG ATAA
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Protein sequence | MDGQIFSVEY LGRYTRKGML HESRIADVTA EHVSFRYKDY RDGQQHKQMR LSCDEFIRRY LLHVLPKGLL RVRHFGFLAN ACRCKKLALI QQQLGKPQVV LVSPLVKEDC SWSCPQCLLG HLQFIGLIRP QSVVMINCQG QPVRMSG
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