| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1280 |
|---|
| Symbol | |
|---|
| ID | 5081007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 1440516 |
|---|
| End bp | 1441970 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640498412 |
|---|
| Product | thiamine biosynthesis protein ThiI |
|---|
| Protein accession | YP_001182807 |
|---|
| Protein GI | 146292383 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTA TTGTAAAGCT GTATCCAGAA ATCATGATGA AGAGCAAACC TGTGCGGATG
CGCTTCACCA AAATGCTCGA AACTAATATC CGTAATGTGC TTAAAAAAGT TGATGAAGAT
GCCAAAGTGC AGCGTCAATG GGACCGAATT ATGGTGATGG TGCCAAAGCA TAAGCCTGAA
TTAGCTCAGG CCTTTGGTGA GCGTCTTGCT TGTATTCCTG GAATTGCTCA CGTCGTACAG
GTTGATGAGT ATAGCTTTGA ATCCGTGGAT GATATTTATC AACAAGCTCT ACCGGTTTAC
CGCGATCAAA TTGCCGGTAA AACCTTCTGT GTACGGGTTA AGCGGACTGG CGATCACGAC
TTTAATTCCA TTGATGTGGA GCGTTATGTG GGGGGCGGTT TAAATCAGTT TACCGATGCG
ATTGGGGTGC GTTTAAAGAA TCCTGATGTC ACCGTTAATC TGGAAATTGA CCGCGACAAA
CTTTACATGG TGACTAAGCG TATCGAGGGT TTAGGTGGTT TCCCTATGGC AACACAAGAA
GATGTGTTGT CCTTGATATC CGGCGGTTTT GACTCAGGTG TCTCTAGCTA TCAATTTATC
AAAAAGGGTG CTCGTACCCA TTATTGCTTC TTCAATTTAG GTGGCGCGCA GCACGAAATA
GGTGTTAAGC AAGTGGCTTA TCACCTTTGG AAAACCTATG GTGAATCCCA TAAAGTTAAA
TTTGTTTCCG TCCCCTTTGA GCCTGTGGTT GCCGAAATTT TAGAGAAAAT CGACAATGGT
CAAATGGGCG TTGTATTGAA ACGTATGATG ATGCGCACCG CGGCAAGAAT TGCTGAACGT
CTTGGCATCC AAGCTTTGGT TACCGGTGAA AGTTTAGGCC AAGTATCGAG TCAAACCTTA
ACCAACTTGA ACGTCATTGA TCGTTGTACT GAACTGCTGA TCTTGCGCCC ATTAATCGCA
ATGGATAAAC AGGATATCAT CAACGAAAGT CGCAGGATCG GTACCGAAGA TTTTGCTAAA
TCAATGCCAG AGTATTGTGG TGTTATCTCA CAAAAACCCA CCGTCAAGGC AGTACTCGCC
AAGGTTGAAG CGGAAGAGAA GAAGTTCTCT GAAGATTTAA TCGACCAAAT TGTCGCACAG
GCCGTCACTA TTGATATTAG AGAGATAGCA GAACAAATGG ACACTCGAAT TACCGAGACT
GAAACTGTCA TCGCCATTGA GACTAATGAA GTGGTTATCG ATATCCGAGC ACCAGAAGAA
GAGGAACATA AACCTCTTAA TATTGAAGGT GTTGAGGTAA AGCGAATCCC ATTTTTTAAA
TTAGCGACCC AGTTTGCCGA TCTCGACAAG CAAAAGACCT ATTTGCTCTA CTGTGAGCGA
GGTGTCATGA GTAAGCTGCA GGCGCTATAT TTAATTGAAC AGGGATATAC CAACGTAAAA
GTGTATCGCC CATAA
|
|---|
| Protein sequence | MKFIVKLYPE IMMKSKPVRM RFTKMLETNI RNVLKKVDED AKVQRQWDRI MVMVPKHKPE
LAQAFGERLA CIPGIAHVVQ VDEYSFESVD DIYQQALPVY RDQIAGKTFC VRVKRTGDHD
FNSIDVERYV GGGLNQFTDA IGVRLKNPDV TVNLEIDRDK LYMVTKRIEG LGGFPMATQE
DVLSLISGGF DSGVSSYQFI KKGARTHYCF FNLGGAQHEI GVKQVAYHLW KTYGESHKVK
FVSVPFEPVV AEILEKIDNG QMGVVLKRMM MRTAARIAER LGIQALVTGE SLGQVSSQTL
TNLNVIDRCT ELLILRPLIA MDKQDIINES RRIGTEDFAK SMPEYCGVIS QKPTVKAVLA
KVEAEEKKFS EDLIDQIVAQ AVTIDIREIA EQMDTRITET ETVIAIETNE VVIDIRAPEE
EEHKPLNIEG VEVKRIPFFK LATQFADLDK QKTYLLYCER GVMSKLQALY LIEQGYTNVK
VYRP
|
|---|
| |