| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1267 |
|---|
| Symbol | |
|---|
| ID | 5080994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 1423427 |
|---|
| End bp | 1424605 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640498399 |
|---|
| Product | ATPase central domain-containing protein |
|---|
| Protein accession | YP_001182794 |
|---|
| Protein GI | 146292370 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0464] ATPases of the AAA+ class |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAGG TATTACTACA AATAAAGGCG CTCACCAATG GTGATCCTTT GTTGACGGCT
GTCATTGTTG GAGTATTAAC ATTTACGTTA ATTGGACTCG TAGGCTACAT GCTAAAAGAT
GTCCCCGCAA AGCTGTTAAG TTGGCTCAGT AGTCTGCTGT TTGTGCGGCT CACTATAGAC
GATAGCCATC AGGCGCGCGC AGAGGTATTC AATAAACTGT CCTTTTTGAT CAGTAATACT
ACTATTCCAT TTTTTTCACG CTCTATCTCT GAGGCCGTGT ACTTTGACTA TAGTGTGAGT
TACGACGGAC GTGTCAGTGT TAAGTCTATC GGCTACGGTA TGCACCTGTT TAAATACGCT
GGTTGTTTTA TGTTGGCTAC CCGCTCTAAG GTCGATAGTA CGATGGCATA CGATACTATT
ACGGTAAGTG CACCATGGTG GGCAAAAGAT AAACTATATC GTTTTTTAGA AGATACTCGT
GGAGACATCT CTACTGAGCC GAAAGTGAAT ATTTTCGAAG AAACCGAATG GTGTCGCTAC
GGCACATTGA AATCATCGGG TTTTAGTGAA TTAGTGCTAG ATGAAGGGTT TAAGCAGGAG
TTGATGAGGG AAGTTGATAA CTTCGCCAGT AGGGGAAAAT CGGTTGTAAG TAAGCTAACC
ATACTGTTAC ATGGCAAAAC GGGTACAGGT AAGACGGGTA TAGCGAGAGC CTTAGCTGTT
GAGTATCATC GCGATCTTTA CATATTGAAT CTATCGACTG TCAATGATGC CACTATTCAT
AAGGCTATTA GAAAAGTGCC ACCCGGAGCT ATGTTGTTAA TAGAGGACTG TGACTGTGTA
AAGGCGACGG TATCACGTGC TGCTGAAAGC AACGTAGATA ATCCACCACT TACTTTAGGT
GGCGTTCTAA ACGCGTTAGA CGGAATCGTT CCTCTTGATG ATTGCCTTGT CATAATGACC
ACAAATCATC TTGATAATCT TGACCCCGCA TTGATACGTA AAGGTCGTGT AGATGTCAAT
ATTGAAGTAC CACTTATCAG TGCAAAACAA GTTAATGAAG ACTACTTTGA GCGTTTTGGC
GCAGTTCTTA ATAGAACTGA GCCATTGTTA GGTTGTGAAG TCTATGAACT CCATCGCAGA
GCGAGCTTAA GATATGGAGT GTGTTGTAAG CCAGTGTAA
|
|---|
| Protein sequence | MNEVLLQIKA LTNGDPLLTA VIVGVLTFTL IGLVGYMLKD VPAKLLSWLS SLLFVRLTID
DSHQARAEVF NKLSFLISNT TIPFFSRSIS EAVYFDYSVS YDGRVSVKSI GYGMHLFKYA
GCFMLATRSK VDSTMAYDTI TVSAPWWAKD KLYRFLEDTR GDISTEPKVN IFEETEWCRY
GTLKSSGFSE LVLDEGFKQE LMREVDNFAS RGKSVVSKLT ILLHGKTGTG KTGIARALAV
EYHRDLYILN LSTVNDATIH KAIRKVPPGA MLLIEDCDCV KATVSRAAES NVDNPPLTLG
GVLNALDGIV PLDDCLVIMT TNHLDNLDPA LIRKGRVDVN IEVPLISAKQ VNEDYFERFG
AVLNRTEPLL GCEVYELHRR ASLRYGVCCK PV
|
|---|
| |