| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1074 |
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| Symbol | |
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| ID | 5081682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1200687 |
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| End bp | 1203305 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640498204 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001182601 |
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| Protein GI | 146292177 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.834793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACCAT CTACCTTTAA GAAAAGTGTA CTAGCTACAA ATATTGCTAT CCTATTGGGC
AGTGCTGTAT CTGTCAGCGC AGTTGCTGCG AATGATGCAG TTGCTGCTCC AGAAAACATC
GAAAAAATTG AAGTTCGAGG AATGAGAGCT TCAATGAAGG CATCTGTTAA CGATAAGCGT
TTTTCTGACG CTGTTGTTGA TGCTGTTACC GCTGAAGATA TTGGTAAATT TCCAGATGGA
GATGTGGGTG AGTCTTTAGG ACGAATTCCT GGTGTTGCGG TTAATCGTCA ATTTGGTCAA
GGTCAACAAG TATCGATTCG TGGTGCTTCA AGCCAGTTAA CCAGTACGTT ATTAAATGGT
CATTCTGTTG CTTCAACAGG TTGGTTTGAT CAACAAAACA TTGATCGTAG CTTCAATTAT
AGTCTACTTC CCCCTGAACT TGTGGGTGGC ATTCAAGTGA ATAAGTCATC TCAAGCAGAT
ATTGCTGAAG GTGGGATTGG TGGCACAGTT ACAGTTAAAA CCCGCAAACC CCTCGATTTG
GATGCAAACT CAGTTTTTTT AAGTGCTAAG GGGGATTATG GTAGTGTTTC TGAAGAAATT
GATCCACAAA CCTCAGGCTT ATATAGCTGG AAAACAGAAG ATGAGAAATT TGGCTTTTTA
GTGGCAGGTT CGTTAGATAA AACTGAATAT CAACGCAATG GTATTGAATC TCTGCTCGGT
TGGGGAGAAA TTGTTCCAAC AACTTTCCAG CAAGATCGTG AACGTACGGC TTTAAATGCT
GCATTTCAAT ATCGGCCAAC GGATGCGCTC GAGTTTGGTC TGAATATCAT GAGCCTTCAA
CTTGATGCAA ATAATGCTAA TACGTCAATT TTTTTATTTC CGACGCAGCG AGGGGAAAAT
ACTTGCCTTA AGAAAAACGC TGCAGGTGTT TGTACCTTAG TTGAGCATAC AGATAAAGAC
GGTTTTGCTT GGGCACAGAC ATGGGCTCGT AAAGCAAGTA TGTCCTCTGA CACTATTGAT
TTAGATTTTA CCTATCAAGC AGATGATTAC AAATTAGAAG GGCGAATTGG TAAAACTAAA
GCTGAAGGTG GAACAGATCT TACATCTAAC TACGGGCAAT CAATCGGTAA ACCTGAAGAT
TTTGCTGGCA TTTATGATGC TACTGGAGAT GTGATAAAAA TCAATATTGC TAATAATTCA
TTTGATGCAA GTGATTTCAA TGGTCAGCTA GAAACGGCAG GTTGGGCACT TAAAAAGCAA
CCGAATACGG ATGAAGAGGC GTTTGCAACA TTTGATATTA CAATCCCTGT TGAATTAGGA
GTCATAACGT CGATTAAATC AGGTATTAGC TATGCCGATC ATGATGTGAC ACAAACAACG
GAAGCTGCAC TATCATCGAA TATAATGGCT AAAGATGCAT CAGCCTATTA CTCTGGCACT
ATGTCATCAG GCGCAGGTTT TACTTTACCT AAACCCATCT TTAATAACAT GATTAATGAT
GCTTACGCTG CTATTGATGG TTTTACTCTC GATAAATCAG GGTACGGTAC ACTACAAGAA
AAGAATTTAG CGCTATATAC CATGGCGACA TTTGCGAGTG AAGGTGTTCG CGGTAACTTT
GGTTTAAGAT ATATTTCTAC AGATGTTGAA TCTGATTATT ATGCATTGAG TGACAGCGGC
GTTTATGCTG ATGTATTAAG CACAGATAAA GCTAGCTATA ACGATGTATT GCCAAGCGTA
AATATTGCAT TTGATTTAGC TAGTGATTTA ATTTTAAGAG CCTCTGCAGC TCAAGTTATT
TCTCGCCCCA ATTATGCTGA TTTATTTGCG ACTTCAAAAT TGCCCGGTTT TAATGATGGA
ACGCCTGGTA ATGAAAAGAA AGTAACTGGT AATGTTAATT TACAGCCTTT TAAAGCATCG
CAAGCGGATT TAAGTTTGGA GTGGTATTTC AGTGGTGAAG GTTTATTTGC GGCAACCTAT
TTTATTAAAG ATGTAAGCTC ATTTATTTCG ACTAGAGAAA AGTTAAATCA AGAAATAGGT
ATAGAAGATC CTAATTTAGT GATTGCAGGC GGCAGTTCAT GTGGTGTCGG TATTTACGAT
TGTTGGACAG TGAGTGAGAA CTTTAATGCG ACTGGTGGTT CAATCGATGG TATTGAACTC
CAGTTGCAGG ATTCTTTTGA CAATGGTTTA GGTTATTCAG TGAATTATAC TTTTGCTGAT
GCTTCATCGC CTGCTGAGAA TTATGCAGAT CGTGTAGGCG TGTTCTCAGA TTCGTCTAAG
CACACTGTTA ACTTAGTTGG TTATTACGAG ATGGATAATT TCTCTACTCG TATTGCGTAT
AACTGGCGTT CAGAATATAT GATGCGTGAA TTACCCGGGT TTTATGGCAA CCGTGAACAT
CAAGCCTATG GAACACTAGA TCTCAGTGCT AACTATAATG TGACAGATTA TTTATCTGTG
ACCTTTGAAG TGGTTAACTT ACTTGAAGAG GATAGTATCC AGAAAGGTGT TTCACCAGTG
AATGCACCTA GTGTCATCAG TGAATTTAAA GATAATTACC CAGTATGGAG CTTCGATGGT
GAGGCTCGTT ATAAACTTGG TCTCGCATTA CGCTTTTAA
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| Protein sequence | MRPSTFKKSV LATNIAILLG SAVSVSAVAA NDAVAAPENI EKIEVRGMRA SMKASVNDKR
FSDAVVDAVT AEDIGKFPDG DVGESLGRIP GVAVNRQFGQ GQQVSIRGAS SQLTSTLLNG
HSVASTGWFD QQNIDRSFNY SLLPPELVGG IQVNKSSQAD IAEGGIGGTV TVKTRKPLDL
DANSVFLSAK GDYGSVSEEI DPQTSGLYSW KTEDEKFGFL VAGSLDKTEY QRNGIESLLG
WGEIVPTTFQ QDRERTALNA AFQYRPTDAL EFGLNIMSLQ LDANNANTSI FLFPTQRGEN
TCLKKNAAGV CTLVEHTDKD GFAWAQTWAR KASMSSDTID LDFTYQADDY KLEGRIGKTK
AEGGTDLTSN YGQSIGKPED FAGIYDATGD VIKINIANNS FDASDFNGQL ETAGWALKKQ
PNTDEEAFAT FDITIPVELG VITSIKSGIS YADHDVTQTT EAALSSNIMA KDASAYYSGT
MSSGAGFTLP KPIFNNMIND AYAAIDGFTL DKSGYGTLQE KNLALYTMAT FASEGVRGNF
GLRYISTDVE SDYYALSDSG VYADVLSTDK ASYNDVLPSV NIAFDLASDL ILRASAAQVI
SRPNYADLFA TSKLPGFNDG TPGNEKKVTG NVNLQPFKAS QADLSLEWYF SGEGLFAATY
FIKDVSSFIS TREKLNQEIG IEDPNLVIAG GSSCGVGIYD CWTVSENFNA TGGSIDGIEL
QLQDSFDNGL GYSVNYTFAD ASSPAENYAD RVGVFSDSSK HTVNLVGYYE MDNFSTRIAY
NWRSEYMMRE LPGFYGNREH QAYGTLDLSA NYNVTDYLSV TFEVVNLLEE DSIQKGVSPV
NAPSVISEFK DNYPVWSFDG EARYKLGLAL RF
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