Gene Sputcn32_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_1063 
Symbol 
ID5081671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp1189689 
End bp1190240 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content43% 
IMG OID640498193 
Producttype IV pilus modification protein PilV 
Protein accessionYP_001182590 
Protein GI146292166 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGAA TCGAACGGTT TGAACAAAGT CATTTCCAAC AAGGCTTCTC ATTGATAGAA 
GTGCTTGTCG CGTTAGTGAT TTTAGTCATT GGCTTAATAG GCATTTTTAA TCTTCATATT 
ATCGCCAAGC GCGGAAGTTT TGAATCATTT CAACAGACGC AAGCTTCTTA TTATGCAAGT 
GACATTATCA ATCGGATGAA GCTTAATCCA ACACAACTGG CAAGTTACCA TGGTGATTAT 
GCTGGTGCTA AAACGGCGAT CACGCCTGTA TCCCCTGCGT GCGAGGGAGT TACTCTCTGT 
ACGCCAGCCC AATTAGTTAA TTGGGATTTG TATGAATGGC AGTCCGCTTT TTCCGGTGAG 
AATGAGGTCG TTGGTTCTCA GCATGTTGGT GGTTTAGATA CGCCAACTGC CTGTATTCGA 
GTTAACGCCA ATACAGTTTC TATCACTATG ACATGGCGAG GGATTACTGA AACGAGTGAT 
GGCATAGATA ACGTAGATTG TGGAACCGCC AGTAAAAGAC GGCGCGTTTT TACTCTGCAG 
ACGGTGATTT AG
 
Protein sequence
MTRIERFEQS HFQQGFSLIE VLVALVILVI GLIGIFNLHI IAKRGSFESF QQTQASYYAS 
DIINRMKLNP TQLASYHGDY AGAKTAITPV SPACEGVTLC TPAQLVNWDL YEWQSAFSGE 
NEVVGSQHVG GLDTPTACIR VNANTVSITM TWRGITETSD GIDNVDCGTA SKRRRVFTLQ 
TVI