| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_1039 |
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| Symbol | |
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| ID | 5081741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1160475 |
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| End bp | 1161743 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640498169 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001182566 |
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| Protein GI | 146292142 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAATTAA GGGATAACTT TAAACGTAAG ACCATAGACC GCTTAGATTA TCGTTACCAT
TTACTCTTAC TTATTGTACC GATAGTACTA TTTGTTCTAC TGTTTATCTT TAATGCTCCC
GCAGAAGGCC GGAGTGTTTT GCCGCTGCTG TTTGTTTGCC TCATTTACAT TTTTGCTTAT
AGCTTAATCT ATTATTTACA CCAAGGTAGA CTCAGTCGAC TATGGCTACA TTTAGAACAA
GTTGTCACTA TTAATGATGC TATCTACGAA CTTGCCCACC TTTCAAATCA ATATAAAGAT
GAGCACGCCT TTCTTGATGC GCTACTAAAC AAAGCCGTTT GTATTATCAA TGGTGCAGAA
ATGGGCAGCA TTATTAAAGT CAATGAAACC AGCCATAAGC TGCATTTTGA ATCTGTTGTT
GGTCTCGACT TAGCCAAACT TAAACAACTG AACTTCACCT TAGAGCAGTC CTTTGAATAT
CGTCTCACCG ATGGCAAGTG TGATCGAGTC GTTGTCGTAA ACGATATGGA AAATATCAAT
TCTGGTAGTG GGTTATCTAA AAAAGATCAA CAAACCTTAT TAACTGTCGC AAAATCGCCC
ATTCGTTCAA CACTTTCAAG CCCTATTCGT GTCGACGGGA AGCTCTATGG AATGCTCAAT
CTTGACAGCA GCCATGTTGA CGCCTTTAAC GATTATGATC GCAACTTGGT TTCTATTTTG
ACCCACGAAG CCAGTAATGC TATCGCTCTT TATCAGAAGT CCCAACAAAT TATAAAGCTC
GCTAATTTTG ACTCTTTAAC AGGACTTTAC AATCGTAAAT ACTTCGAGGA CAGCTTACTG
CAATGGCAAC ATAAAGCACA TTTTGGAAGC TTTGTAGTAA TCATTGATAT GGATGATCTC
AAAACCATCA ATGACACTTA TGGGCATCAG GCGGGTGATC TCGCCATAAA ACAAGTTGCG
GATACCATTT TGAGCTACTG GCAAAATAAA GGGATAGTCT CACGCTTTGG AGGAGATGAG
TTTGTTGCCC TATGCCATGG TGCACAAGCT GAGCTCGAGC AAGATTTGCA AAATATGCAG
TTCAGTCTGC AGCAAAATAC GGAGCTCTGT TTAGGCTTTA GTTTTGGTAT TGCGCTATTC
GAAAGCGATT GGTCAAAATC CTTTAAACAG GCCGATCATG CAATGTATGA GCATAAACGA
GCGAAGAAAA TAGCCCTTAA AGCATCAGAA GCCTTTACAG ATACCGTCGA TAATATCACG
GAGCAATAA
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| Protein sequence | MKLRDNFKRK TIDRLDYRYH LLLLIVPIVL FVLLFIFNAP AEGRSVLPLL FVCLIYIFAY
SLIYYLHQGR LSRLWLHLEQ VVTINDAIYE LAHLSNQYKD EHAFLDALLN KAVCIINGAE
MGSIIKVNET SHKLHFESVV GLDLAKLKQL NFTLEQSFEY RLTDGKCDRV VVVNDMENIN
SGSGLSKKDQ QTLLTVAKSP IRSTLSSPIR VDGKLYGMLN LDSSHVDAFN DYDRNLVSIL
THEASNAIAL YQKSQQIIKL ANFDSLTGLY NRKYFEDSLL QWQHKAHFGS FVVIIDMDDL
KTINDTYGHQ AGDLAIKQVA DTILSYWQNK GIVSRFGGDE FVALCHGAQA ELEQDLQNMQ
FSLQQNTELC LGFSFGIALF ESDWSKSFKQ ADHAMYEHKR AKKIALKASE AFTDTVDNIT
EQ
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