Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_1028 |
Symbol | |
ID | 5081730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 1147970 |
End bp | 1148344 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640498158 |
Product | ISSod10, transposase OrfB |
Protein accession | YP_001182555 |
Protein GI | 146292131 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTGTCCGG CAACGGGGCG ACACAAGCGG CATGCCAATT GCGAATATAT GTACGAATAT TTAAAGCTGA TCTCAACCGC GACGACATTC GGACGCCACA TACTGGTCAT CATGGGTGGA GCTAGTTGGC ATCAACAGGA TTTGGCCGAT GACTTTGATA ATCTCACCCT CCTCAAGTTG CCTCCTTATT CACCGGAGTT GAATCCAATA GAGCAGGTAT GGCAATGGTT GCGTCAAAAT GTGTTAGCCA ACCGTTGTTT TAGTGATTAT GACGACATTG TCGAACAGTG TTCCATCGCG TGGAATACCT TCATTGGGAA GAAAGTAAGA GTGAGTAAAT TGCGCACTAG ACAGTGGGCA AATCCGACCA ATTAA
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Protein sequence | MCPATGRHKR HANCEYMYEY LKLISTATTF GRHILVIMGG ASWHQQDLAD DFDNLTLLKL PPYSPELNPI EQVWQWLRQN VLANRCFSDY DDIVEQCSIA WNTFIGKKVR VSKLRTRQWA NPTN
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