| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0952 |
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| Symbol | |
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| ID | 5081864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 1062269 |
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| End bp | 1063168 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640498077 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001182480 |
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| Protein GI | 146292056 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.102057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTTA ATTATTCCCT AGACGATATG CGTTTATTTT GGGTTGTGGC ACAGCAGGGC
AGTTTTAAGC TCGCGGCTGA ACATTTAGGT ATTCCACCGT CTACCTTAAG TCGTCGAATC
AATCTATTAG AACAGTCTTT AGGGTTGCGC TTACTGCACC GAGACGCCCA TAGAGTCAAC
CTTACCGCCA CGGGTCAGCG TTATCTCGAA CGTTGCGGCC CACTGTTTAT CGAGTTAAAC
CAAGTATCGG GTGAGCTGCA TGCGGATAAA CATCAAGCGG TTGGAAAACT GCGGATCTCG
GCGCCCATCA ACACCACCTA CCTTTGGTTG GGGGAATCAC TCAACGCCTT TCAATTACGC
TATCCTAATA TCGATATCGA TTTAAGCCTG TCGAATATGA ATATCGATGT GAGTGAAAAC
GCGATTGATA TCGCCTTTCG GGTTGGCGAA CCTAAAGATC CTGATTGGAT TGCAAGGCCA
CTCACCACCA TTAGCTTTGT CCTTTGCGCC AGTAGTACGG CAACGCAATG GCATTCTCTG
CAATCTATAG AGGAGCTCGA ACAACATCCC GTTATTATCG CAAAACCAGC TAAAACATGG
CGCTTACAAC ATAATATCAC TGGGCAAGAT TTCGAATTTG AGCCGAGGGG CAATATCAAA
TTAGCCGTCG ATGATATGGC TATCGCCAGT CAAGCTGTGA TGGCAGGGCT CGGTATTGGA
CTATTACCAA TTAGCATGGC GAGTGAACGA ATACAAAGCG GCAAGCTTAT TCAAATACTG
CCCGAGTGGA AAGGTGCTCC GCGTACCGCT TACTTGATGT ATCGCGATCG CGATAATCTT
CCTCTACGGG TTAGGCTCTT GATTGATTTT ATGCTGGAAA ACCCACCCTC AGCTTATTAA
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| Protein sequence | MKLNYSLDDM RLFWVVAQQG SFKLAAEHLG IPPSTLSRRI NLLEQSLGLR LLHRDAHRVN
LTATGQRYLE RCGPLFIELN QVSGELHADK HQAVGKLRIS APINTTYLWL GESLNAFQLR
YPNIDIDLSL SNMNIDVSEN AIDIAFRVGE PKDPDWIARP LTTISFVLCA SSTATQWHSL
QSIEELEQHP VIIAKPAKTW RLQHNITGQD FEFEPRGNIK LAVDDMAIAS QAVMAGLGIG
LLPISMASER IQSGKLIQIL PEWKGAPRTA YLMYRDRDNL PLRVRLLIDF MLENPPSAY
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