| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0939 |
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| Symbol | |
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| ID | 5081851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1047827 |
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| End bp | 1049878 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640498064 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001182467 |
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| Protein GI | 146292043 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0878917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGTC GTTACTTTAT CCTATCGTTT TGTGCCGTTG CGGTTTCTGT TCACTATTCA
AGTCATCTTT TTGCGAATCC TCTCGACTCT CAAACCATCA ATCTTTATGA AGTGAATGAT
ATTTACCACA GTAGCGATGA TGTGATAGCG CTGAGTCGCT TGAAAACCTT GACAATATTA
CCAGCCGATC ACAGTGGCAA TCCTGCAAAT ATCAGTATGC GCTCAGTTAG CCAAGGTGTG
GCCGTGTTGC AGGACCGCGT TTACTTCTCA CCGGCACCTT ATTCAGCACC ACAATTACAG
TTATTGCCTA ATCTACTGCA ACAGCAAAGT GTGACAGTTA CGCCATTATC GGAGATGACT
GTTGGTGGGC AGGGGGCATT TGGGGTGATC AGCTATCAGA GCCTTGCGAT GCTAGATCAA
GCACAAGAGA GCAAAATCAC AGTTGAAGGT TCGACTGACT CCGATATGAG TGCTGAAATG
AATTGGGGGG TTAAGCAGAA AGAATATGGC ACGATATTGG CGGTTAACTA TGAAAAGAAT
AAAGGTGAGG GTGATTTTTT CACTGGCCGC GATACGGATA GAACAAGCAC TGACATTCTT
TTTAAGATTA ATGCATCGAG TCTATTAGGG GCTAGAAACC CTCAGATGAC CGAGTTTACC
TATCAGTTTC TCGATGTTGA TAGTTATCGC TCACTCTTGG GGGTGACTGG CGCCGACTGG
TTGAAAAATC CCATGATGCA GTATTCTGCT AGCGCGGAAG ACCAAGCCAT AGGTCGATAT
CATAAATATC AACTTTCCCA TCAGGTTAAC CTCGGTAATA GCCAATTTAT CACGGACTTT
TATTATCACT CCTATGCCCA ACAGTTAAGC CAAGTGAACC AATTCAATGG GCTCGTGATA
GATAGGCAAA GTCTTGCCGA GATCGCCGCA TTTGATCGCC AGCCTTGGAA TAGTGGTGCT
GAACTTGCCG CCCTTGAGCA GGATAATGAT TACAGCGCTT TTGGCGCGCA GACCCAATCT
GTAAATCAGT ATGGTGAACA TCAAATTATT TACAGTGCTC GTTATCATAC GGATAAAGCT
GAAATGCGAT TTGCAGAGCA GCAATCAATG TGGCTGCCAG ATAGAAGTAT TGTCAAGGCT
GCATCATCTT CGATATTGGC CTATACAGAT GATGCAACGG CATTGACTTC ATCAGTTGAT
TCATTACTTA AATGGGAAGG ATTACAGTTT AAGCTGGGCG TTACCTATGA GCATGTTGAT
GTTAATCGTG AGGTGCATTC AGCCTATGCC GGACTCGATG CTGTTGATTT TTCTGACAGT
GATTGGATGC CGCAGTTGGG GGTTTTCTAC GATGCGGGGA ATTGGCGTTT TAGTACGGAT
ATTCGACGGG CTTGGACGGC CGCGAGTGCG GGAAATCTTG AACAGGAAGC ACAGGTCTCA
CTCCATTACC AAGTGAGTAT GCAATATGCC CTAGAGGGGT TTAATGCCAA TCTTAAAGCC
TACATGCAGG AGTTTGATAA TCTGCATGTG GATTGCAACG CTTATTCTTT ATGTGCTGAT
GCGCGTTTAT TCACCCAAGA GAATATTCCT GATGTGCAGA CCTATGGCAT TGAAGTGAGT
CTGGGCTATT TGTGGAATGT TGAACATCTG ACGTTTCCCC TCTCACTGAA TTACCAATAT
ATCAATTCAG AATACCAAAC CAATACTTGT ACCGAGATCC AAGGTTGTGT GTTCGCGGGT
GATAAAATGG CGTGGCTACC CGAACAGCAA CTGCAATTTA GCGCAGGAAT GAAATACGAA
GCGTATGAAG TTAATGTCAA TGCGTTTTAC CAATCGGAAA GGGAGTTGAG TCAGTTTGGT
GCTGAATTAA CCCCCATTGC TGGGCAGCTA AGGGTAGATT TAGCCGCAAG TTATCAATTT
GATCGCCATC ATCGATTTTA TTTTAGAGTC GAAAATCTGT TGGATGAGTC TTTGGTAACA
ACAGCATCAA ATAGCGGAAT TCGAGTTGAA AATGGACGTA TCAGCTATTT GGGGTATCAA
TGGCGTTTCT AA
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| Protein sequence | MSSRYFILSF CAVAVSVHYS SHLFANPLDS QTINLYEVND IYHSSDDVIA LSRLKTLTIL
PADHSGNPAN ISMRSVSQGV AVLQDRVYFS PAPYSAPQLQ LLPNLLQQQS VTVTPLSEMT
VGGQGAFGVI SYQSLAMLDQ AQESKITVEG STDSDMSAEM NWGVKQKEYG TILAVNYEKN
KGEGDFFTGR DTDRTSTDIL FKINASSLLG ARNPQMTEFT YQFLDVDSYR SLLGVTGADW
LKNPMMQYSA SAEDQAIGRY HKYQLSHQVN LGNSQFITDF YYHSYAQQLS QVNQFNGLVI
DRQSLAEIAA FDRQPWNSGA ELAALEQDND YSAFGAQTQS VNQYGEHQII YSARYHTDKA
EMRFAEQQSM WLPDRSIVKA ASSSILAYTD DATALTSSVD SLLKWEGLQF KLGVTYEHVD
VNREVHSAYA GLDAVDFSDS DWMPQLGVFY DAGNWRFSTD IRRAWTAASA GNLEQEAQVS
LHYQVSMQYA LEGFNANLKA YMQEFDNLHV DCNAYSLCAD ARLFTQENIP DVQTYGIEVS
LGYLWNVEHL TFPLSLNYQY INSEYQTNTC TEIQGCVFAG DKMAWLPEQQ LQFSAGMKYE
AYEVNVNAFY QSERELSQFG AELTPIAGQL RVDLAASYQF DRHHRFYFRV ENLLDESLVT
TASNSGIRVE NGRISYLGYQ WRF
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