| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0927 |
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| Symbol | |
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| ID | 5081839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 1031991 |
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| End bp | 1032770 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640498052 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001182455 |
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| Protein GI | 146292031 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACGG TTTTTCATCC GCAACAACTT GAGCAAGAGC CGCTTGCTGA TATTTTCTTT
AACTATGAAG CATTTGTGCC AAATACAGTC ACACCTAAAC ATCAACATTC ATGGGGGCAA
CTACAGTTAA TTAGCGGAGG TATTATGGAG TTATATGCCG CAGGGCAACG ATTTTTGTCC
CCTTCACAAT ATGCGATTTG GGTACCCGCG GAGATTGAGC ATGAGAGTTT CACTCGCCGC
AGTATCCACT ATTGTTCGAT GAATATCACG GCGAAAAGGT CACAAAACCT TCCACTTGAG
CCTTGTCTTT TAGCTTTAAC ACCGATAGCT CAATCGATAG TCAATGACTT TCGTGAGCGG
CAAATCAAAG TAGTAGAAAC GCTAACCGAT CAGCGCTTAG TTGAGGTCTT GCTCGATCAA
CTGACCTTAG CTCAAGTGTT ACCGCAATTT ATTCCTACGG CCACCGATAA GTTATTACTG
CCACTCTTGC AGGCGCTTGA AGCCGATCCC GCAAACCCAA AGACTTTCAA AACTTGGGCG
AGTGAGTTAC ATACCACTGA GCGCACCTTA GCTCGCCGCT GCCATGAGAT TCTGGGCATG
AGTTTTACCG AGCTAAGACA AAGGCATAAG TTTATCTATT CATTACAACT CTTGCGTCAG
GGACTTGCGA TCAAAGAGGT GGCGTTAACG CTCGGCTACA ACCAAACTTC ACCTTATATT
GTTATGTTTA AAAAATATGC CCAGTGCTCA CCTGAACAGT ATCGCCGCCG CGTGGGTTAG
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| Protein sequence | MQTVFHPQQL EQEPLADIFF NYEAFVPNTV TPKHQHSWGQ LQLISGGIME LYAAGQRFLS
PSQYAIWVPA EIEHESFTRR SIHYCSMNIT AKRSQNLPLE PCLLALTPIA QSIVNDFRER
QIKVVETLTD QRLVEVLLDQ LTLAQVLPQF IPTATDKLLL PLLQALEADP ANPKTFKTWA
SELHTTERTL ARRCHEILGM SFTELRQRHK FIYSLQLLRQ GLAIKEVALT LGYNQTSPYI
VMFKKYAQCS PEQYRRRVG
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