| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0741 |
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| Symbol | |
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| ID | 5082049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 827850 |
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| End bp | 828932 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497866 |
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| Product | periplasmic serine protease DegS |
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| Protein accession | YP_001182270 |
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| Protein GI | 146291846 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.905633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTATAA AAGACACCCT GTTGTATCTC GGTAAAGCCA TCCTTTTCGG TCTTATCATG
GCGGCAATGT TTTTATTGGT GACTCGTTAT TTCGATAGTA ACAATCTCGG GAATACTCTA
CTGCAAACCC GCGCCAATAA TACCGTTGAA CTTTCCTTTG CCAAAGCCGT TCGCCGGGCA
GCCCCTGCCG TTGTCAATAT CTATAGTCTC AGTATCGATC AACGTCGCCC TCTCAATTCT
GGCTCACTCC AAGGTCTTGG TTCTGGGGTA ATAATGAGTA AGGAAGGTTA TATCCTTACC
AATTATCATG TGATTAAAAA AGCCGACGAA ATTGTGGTCG CACTACAGGA TGGACGTAAA
TTTACCTCTG AAGTCGTGGG CTTTGATCCT GAAACCGATT TATCGGTTCT TAAAATTGAG
GGGGATAATT TACCGATTGT CCCGGTTAAT CTTGATAGTC CACCTCAAGT AGGTGATGTC
GTACTTGCCA TTGGTAATCC CTATAATTTA GGTCAAACCA TTACCCAAGG TATCATCAGT
GCCACTGGGC GCAACGGGTT AAGTTCAGGT TACTTAGACT TCTTGCAAAC CGATGCTGCG
ATTAATGCGG GTAACTCCGG TGGCGCATTA ATTGATACTA ATGGCAGTCT TATTGGTATA
AACACTGCAG CCTTCCAAAT TGGTGAAGAA GGGGGGGGGC ACGGCATTAA CTTCGCTATT
CCGATTAAAT TGGCCCACAG CATTATGGGC AAGTTAATTA AAAATGGCCG CGTTATCCGT
GGAGCATTAG GCATTTCTGG CGAACCAATT AACCCTGTTG TGGCACAAAT TCTTAATCTT
CCCGATCTAC GTGGCGTATT AGTGACAGGT ATCGATCCTA ATGGTCCAGC AGCACGAGCA
CAGCTAATGC CAAGGGATGT GATCATTAAA TACGAGGGTG AAGATGTCCC CGGCGTCGAG
ATGCTGATGG ATCGCATAGC AGAAACGCCC CCCGGCAAAA AAGTGATGAT GACAGTGATA
CGCCAAGGAA AACCTCAAGA GTTACCCGTC ATTATTGATG AAAAGGTTGT GGTTGATAAT
TAA
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| Protein sequence | MTIKDTLLYL GKAILFGLIM AAMFLLVTRY FDSNNLGNTL LQTRANNTVE LSFAKAVRRA
APAVVNIYSL SIDQRRPLNS GSLQGLGSGV IMSKEGYILT NYHVIKKADE IVVALQDGRK
FTSEVVGFDP ETDLSVLKIE GDNLPIVPVN LDSPPQVGDV VLAIGNPYNL GQTITQGIIS
ATGRNGLSSG YLDFLQTDAA INAGNSGGAL IDTNGSLIGI NTAAFQIGEE GGGHGINFAI
PIKLAHSIMG KLIKNGRVIR GALGISGEPI NPVVAQILNL PDLRGVLVTG IDPNGPAARA
QLMPRDVIIK YEGEDVPGVE MLMDRIAETP PGKKVMMTVI RQGKPQELPV IIDEKVVVDN
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