Gene Sputcn32_0729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0729 
Symbol 
ID5082037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp816188 
End bp817348 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content48% 
IMG OID640497854 
Productmethionine gamma-lyase 
Protein accessionYP_001182258 
Protein GI146291834 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTA AAACCAAATT ACTTCACACC CATTATGCCG CTGATAACTC GACGGGCGCG 
CTTACAACTC CTATCTATCA AAGTAGCACC TTCGCCTACG GTAGTGCTGA GGATGGTCGG 
GCCCGTTTTG CTGGTGAGCA ACCGGGTTTT ATCTACAGTC GCATGGCGAA TCCGACAGTG 
CAGGCGCTTG AATATCAATT AGCACAACTG GAAGGGGCTG ATGAAGCACT CGTTGTTGCG 
AGTGGGATGG CGGCAATCAG CAGTATTTTC TATGCCTTGG CCAGTCAAGG TGATGAAATC 
GCATTTATCG ACCCCGTATA TGGTGGCACT GCGGCATTTT TAATCCAAAC GTTAACTCGC 
GCGGGTATTA CCGTGCGCCG TTATCAAGAC GATGATCATT TATTGGCAGA GATTACCGCC 
GAAACAAAAA TTATTTTATT TGAGCCCATC ACCAATCCGA CCCTAAAAGT CAGCGACTAC 
CGTAAGGTTA AGCTTGCCGC CGAAAAAGTG GGCGCTATAA CCATTTGTGA TAATACGTTT 
TTAACCCCGT ATTTATTCAA ACCGCTGGAA CATAGCATTG ATATCGTGAT GCACAGTGCC 
ACTAAGTATC TAAGTGGTCA TGGCGATTTA ATCGCCGGAG TTGTCGCTGG ACCTAAGGCA 
TTAATGCAAC CTATTCGCAC TATAGCGCTT AAACATATCG GCGCCGCGAT TGGGCCACAG 
GAAGCCTATT TATTACAGCG AGGCTTACGT ACCTTAGCTC TGAGAATGGA TGCCCATCTT 
GCGGGCGCGG CTAAGGTCGC CGCTTTTCTT GCAACCCATC CGAGCGTTAC AAAAGTTTAT 
TACCCTGGGC TAGCAGAGGA TCAAGGTCAT CAAGTTCTGA GTGAAACAAT CAACGCCTTT 
GGCGGTATGG TGAGTATTGA GCTCGAAGGC GGTTTTAACC GAGCGGCGCA GTTTTTAGAT 
CATTTGAACT TGTTTACTCA AGCGGTCAGT TTAGGTGACT TAGAGAGCCT TGCCTGTCAT 
CCAGCCAGCA CCACCCATGC TGCTATGGAT GCTGCGAGTC GGCTAGCTTC AGGGGTGAAT 
GACAACCTGA TTAGATTGAG CATTGGTGTG GAAGATCCTC AAGATTTGAT TGCCGATCTT 
GAGCAAGCCT TAGTGTTTTA A
 
Protein sequence
MQFKTKLLHT HYAADNSTGA LTTPIYQSST FAYGSAEDGR ARFAGEQPGF IYSRMANPTV 
QALEYQLAQL EGADEALVVA SGMAAISSIF YALASQGDEI AFIDPVYGGT AAFLIQTLTR 
AGITVRRYQD DDHLLAEITA ETKIILFEPI TNPTLKVSDY RKVKLAAEKV GAITICDNTF 
LTPYLFKPLE HSIDIVMHSA TKYLSGHGDL IAGVVAGPKA LMQPIRTIAL KHIGAAIGPQ 
EAYLLQRGLR TLALRMDAHL AGAAKVAAFL ATHPSVTKVY YPGLAEDQGH QVLSETINAF 
GGMVSIELEG GFNRAAQFLD HLNLFTQAVS LGDLESLACH PASTTHAAMD AASRLASGVN 
DNLIRLSIGV EDPQDLIADL EQALVF