| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0692 |
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| Symbol | |
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| ID | 5082100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 777433 |
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| End bp | 779469 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497817 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001182221 |
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| Protein GI | 146291797 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.218448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAG CTGTATGTTT TTTACCGCTT TTGGGGTTGT CGTACACGGT TATTGCCGAA
GATTTGGCCG ATAATATTGA ACGACTTGAA ATTCGTGGTA GGCAAATTAA TACCTTAGGA
CATAGCACTT CTGCTTCGGA GGGGATTGTC GGTGCGGCGG AGATAGCGAG TCGACCTCTG
CTACGAACGG GAGAGATTTT AGAATTTGTC CCTGGGATGA TAGTTACCCA ACACAGTGGT
TCAGGCAAAG CGAATCAGTA TTTTTTGCGC GGGTTTAACT TAGACCATGG GACTGATTTT
AATACTCGTG TCGAAGGTAT GCCTGTCAAT ATGCGCACCC ATGGGCATGG TCAAGGCTAT
ACGGATCTTA ACTTTTTAAT TCCCGAGCTT TTAGGGGAGA TCCGTTATGC AAAAGGGGCG
TATTATCCAG AGGTTGCCGA CTTTTCTGGT GCCGGAGCCG CGCAGTTGAT GCTTGCAGAC
CAACTGGCTT ATAACCAAGT TGGGGTGACT TTAGGGGAGT ATGGTTACCA GCGGCTGGTG
GCGACTCAAG CGTTAACTAC GGATGTTGGG CGTTTTATTC TTGGTGCAGA GTTACAAGCC
TATGATGGCC CATGGAAGGA TATCAATGAA GATGTTAGCA AGGTTAATGT CGTCGCCCGT
TATTTAACGC GACTCGCTGG CAGTGATTTA AGTGTGACTA TGATGGCCTA TGACAATAGC
TGGAATTCGG CGGATCAGAT CCCCGCACGG GCTGTGGAGT CTGGACTCAT CGATTTTTAT
GGATCCTTAG ACAAGGATGT GGGTGGCGAT GCCAGTCGTT ACAGCATTTC TGCCCATTAT
GATGCGGGGA ATTGGCAGGG AAATGTGTAT GCAATTCGTT CAACCATGGA TTTATTCTCA
AATTTTACCT ATTTCCTAAA TGATCCCATC AATGGCGATG AATTTGAGCA AGTCGATGAA
CGCACCCTTT GGGGTGGGGA TATTAAGCGT GATTGGCATA CATCCTTAGG TGGAACTCAG
ATTAATTACA GTTTAGGTGC TGATATACGT TACGACGATA TAAGTGCAGT AGGGTTATAC
AATACTCAGG CGCGTCAAAG GTTAAGCACG GTAAGGCTTG ATGAAGTGCA GGAATTATCA
GGGGGTCTAT TTGGTAAGCT CGAGTGGCTA CCCTTTGAGC AATGGCGTTT TAATCTAGGG
CTGCGTTACG ACTATTTTGA TGTGCAGGTT GATAGTGACA ATTCGCTCAA CAGTGGTGAT
GCGTCCGATG GTATGCTGAG CCTCAAGGCG GGGGCTTCCT ATTTATGGAG TGATAATCTT
GAGCTTTATG TGAATGCAGG CCAAGGATTG CACTCAAACG ATGCTCGTGG AGCAACGATC
CAAGTCGATC CTGTTAGTGG AGATGAGGTT GATAAAGTCG ATCTTTTAGT GCGCTCCAAT
GGGGGTGAGT TTGGTGTCAA ATATTACGAC CGCGATTTTA TTAACTTTTC TGCGGCAGTT
TGGTATTTGC AATTGGATTC GGAGTTAGTC TTTGTTGGCG ATGCAGGTAA CACTGAGCCA
AGCCGTGCGT CTGAGCGTTA TGGTGCTGAA ATAACAGCAT ATTACTGGCT AAATGATGAT
ATTAGTCTTG ATATGGAGTT GGCATGGACC CATGCTCGAT TTACCGAGGA TGAAGCCGAA
GAAGGCAAAT ATATCGATGG TGCAGTGCCT TTTGTTGGCA GTGCAGGGAT AACCTATCGC
CCCGACGGTG GCCTGTATTC CAGCATTCGC ATTCGATACC TTGGTGAGCG GGTGCTTGAT
AATTTTAACG AGCATAAGGC CGATGATACG ACCTTAGTGA ATCTTGCTCT GGGTTATAAA
TTTGACCACT TTGACACTAA ACTTGAATTG TTAAATCTGT TTGATAGTCA GGACCATGAT
ATCGATTATT TCTATGCTTC ACGCTTACCC GGCGAAGCGG CCGAAGGCAT AGAAGATCAG
CACTATCATC CCGTTGAACC CCGTATGATT AGGGTGAGTG TAAGCTATCA CTTCTAG
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| Protein sequence | MKLAVCFLPL LGLSYTVIAE DLADNIERLE IRGRQINTLG HSTSASEGIV GAAEIASRPL
LRTGEILEFV PGMIVTQHSG SGKANQYFLR GFNLDHGTDF NTRVEGMPVN MRTHGHGQGY
TDLNFLIPEL LGEIRYAKGA YYPEVADFSG AGAAQLMLAD QLAYNQVGVT LGEYGYQRLV
ATQALTTDVG RFILGAELQA YDGPWKDINE DVSKVNVVAR YLTRLAGSDL SVTMMAYDNS
WNSADQIPAR AVESGLIDFY GSLDKDVGGD ASRYSISAHY DAGNWQGNVY AIRSTMDLFS
NFTYFLNDPI NGDEFEQVDE RTLWGGDIKR DWHTSLGGTQ INYSLGADIR YDDISAVGLY
NTQARQRLST VRLDEVQELS GGLFGKLEWL PFEQWRFNLG LRYDYFDVQV DSDNSLNSGD
ASDGMLSLKA GASYLWSDNL ELYVNAGQGL HSNDARGATI QVDPVSGDEV DKVDLLVRSN
GGEFGVKYYD RDFINFSAAV WYLQLDSELV FVGDAGNTEP SRASERYGAE ITAYYWLNDD
ISLDMELAWT HARFTEDEAE EGKYIDGAVP FVGSAGITYR PDGGLYSSIR IRYLGERVLD
NFNEHKADDT TLVNLALGYK FDHFDTKLEL LNLFDSQDHD IDYFYASRLP GEAAEGIEDQ
HYHPVEPRMI RVSVSYHF
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