| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0442 |
|---|
| Symbol | |
|---|
| ID | 5081426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 477763 |
|---|
| End bp | 478176 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640497562 |
|---|
| Product | thioester dehydrase family protein |
|---|
| Protein accession | YP_001181973 |
|---|
| Protein GI | 146291549 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAT CGAGTTTACC GCCGATCCTG CATTCCAATA TCGGCATTGA TAACATTGAA
TTACGCCTAT TAGTGGCGGC CGACCTTGAA TCTTTTAAGG GACATTTTCC CGAGCAAGCC
GTACTGCCAG GCGTGACGCA ATTAGATTGG GCGGTGCGTT TAGGCTGCCA ATATTTCGGC
TATTGCGAAG CCGTAGCCAA CTTAGAAGTG CTTAAGTTTC AGCAACTCAT ACTGCCAGGG
CAAGAAGTCA CCTTAAGCAT TAGCAACAAT GCGGCTAAGG GAAAACTTAC CTTCGCCTAT
AGCGATGGTG AAAACCGCTA TGCATCAGGC CGTATCGCCT TTGAGACCAC CCCATTGGTC
AATCAGCCTG CCGATACCAC TAATGCCAAC AGCAACGGGG CGAGCCAGTG CTAA
|
|---|
| Protein sequence | MIKSSLPPIL HSNIGIDNIE LRLLVAADLE SFKGHFPEQA VLPGVTQLDW AVRLGCQYFG
YCEAVANLEV LKFQQLILPG QEVTLSISNN AAKGKLTFAY SDGENRYASG RIAFETTPLV
NQPADTTNAN SNGASQC
|
|---|
| |