Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0424 |
Symbol | |
ID | 5081408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 459054 |
End bp | 459620 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640497544 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001181955 |
Protein GI | 146291531 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGACGA TAAACAGCTA TCTCGCCACC ACGCTTAAAG CACTTCGCAA CCAAAAGGGA TGGAGTTTAG ATAAAGCTGC CCAAGAGACG GGCGTGAGTA AGGCCATGAT AGGACAAATC GAGCGCGGTG AATCAAGCCC AACCATTGCG ACGCTGTGGA AAATAGCCAG TGGATTCAAT ATCTCGCTGT CGACCTTTCT CGAACCCACA CCCCAGAGCC AAGGCGCAGT ATTCCGTAAG CCCGACGAGT TACGCCAACA ACCCGCTACC GACGGCATGC TAGTCGCCTC ACTGTTCCCC TTTGAAGAGC GCTTCGGTTT TGAGATGTTT GAACTCACGC TGCTGCCAAA CTATGAGCGC CTTTCTGAGC CCCATGAAAC GGGTGTCACT GAGCATGTCA TTGTCTTGAG CGGTACTATG GAAGTGCTAG TCGATGGCGA GTGGCAACCT CTCAAGCAAG GTGAAGCAGT ACGATTTGCG GCCGACAAAC CCCATGGCTA TCGCAATCTA AACGAGCAAG CCGTGGTATT CCACGACATC ATTCACTACC AACGAGGCAG TATCTAG
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Protein sequence | MQTINSYLAT TLKALRNQKG WSLDKAAQET GVSKAMIGQI ERGESSPTIA TLWKIASGFN ISLSTFLEPT PQSQGAVFRK PDELRQQPAT DGMLVASLFP FEERFGFEMF ELTLLPNYER LSEPHETGVT EHVIVLSGTM EVLVDGEWQP LKQGEAVRFA ADKPHGYRNL NEQAVVFHDI IHYQRGSI
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