Gene Sputcn32_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0424 
Symbol 
ID5081408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp459054 
End bp459620 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content52% 
IMG OID640497544 
ProductXRE family transcriptional regulator 
Protein accessionYP_001181955 
Protein GI146291531 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGACGA TAAACAGCTA TCTCGCCACC ACGCTTAAAG CACTTCGCAA CCAAAAGGGA 
TGGAGTTTAG ATAAAGCTGC CCAAGAGACG GGCGTGAGTA AGGCCATGAT AGGACAAATC
GAGCGCGGTG AATCAAGCCC AACCATTGCG ACGCTGTGGA AAATAGCCAG TGGATTCAAT
ATCTCGCTGT CGACCTTTCT CGAACCCACA CCCCAGAGCC AAGGCGCAGT ATTCCGTAAG
CCCGACGAGT TACGCCAACA ACCCGCTACC GACGGCATGC TAGTCGCCTC ACTGTTCCCC
TTTGAAGAGC GCTTCGGTTT TGAGATGTTT GAACTCACGC TGCTGCCAAA CTATGAGCGC
CTTTCTGAGC CCCATGAAAC GGGTGTCACT GAGCATGTCA TTGTCTTGAG CGGTACTATG
GAAGTGCTAG TCGATGGCGA GTGGCAACCT CTCAAGCAAG GTGAAGCAGT ACGATTTGCG
GCCGACAAAC CCCATGGCTA TCGCAATCTA AACGAGCAAG CCGTGGTATT CCACGACATC
ATTCACTACC AACGAGGCAG TATCTAG
 
Protein sequence
MQTINSYLAT TLKALRNQKG WSLDKAAQET GVSKAMIGQI ERGESSPTIA TLWKIASGFN 
ISLSTFLEPT PQSQGAVFRK PDELRQQPAT DGMLVASLFP FEERFGFEMF ELTLLPNYER
LSEPHETGVT EHVIVLSGTM EVLVDGEWQP LKQGEAVRFA ADKPHGYRNL NEQAVVFHDI
IHYQRGSI