| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0342 |
|---|
| Symbol | |
|---|
| ID | 5081221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 369656 |
|---|
| End bp | 370120 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640497458 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001181873 |
|---|
| Protein GI | 146291449 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.141993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACATA CAACAAGTGT TTGGCCTATG TACGTTTCAC TCAAAAAAGT AGAGACACAT
GTAGGCCGCT GGACCTCAGT TAAATGGGAA ATAGATCATT TACTTCCCGC GACCCATGAA
GCCCCCGAAG GTGCAACATT AGTCTTACTT GAGTTGCACA AAGACGAACG AGCTAGCTAT
CGCATCAATC TAGACATGGA CAATGCGATG TTGTTCCTCG TCTGTGATGA AATGGCAGAT
GGTACATGGG TACCCGCTTT ACTCTCGGCA GACCAAAATG TTGCAGCAGG TTGTCTTGAA
GGAAATACAC CTGTACTTAA TATATTAATG CCAGAAGCCA TCGCCTGTTG GATTGAAGCC
TTCATCACCC AATACGGTGA AGTCGAAATT TCGGCCCATC GCCGTCGACA TGTCGATGGG
CGTAACAATC AAGGCCCTAG TAGCGATCCA TTACGGAGGA ACTAA
|
|---|
| Protein sequence | MQHTTSVWPM YVSLKKVETH VGRWTSVKWE IDHLLPATHE APEGATLVLL ELHKDERASY
RINLDMDNAM LFLVCDEMAD GTWVPALLSA DQNVAAGCLE GNTPVLNILM PEAIACWIEA
FITQYGEVEI SAHRRRHVDG RNNQGPSSDP LRRN
|
|---|
| |