Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0316 |
Symbol | |
ID | 5081195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 338992 |
End bp | 339423 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640497432 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001181847 |
Protein GI | 146291423 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.168917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAAGT TCGATACTGC AATCATTAAC TGTTTACGTC AAAATGCACG CCAGAGCGTG TCACATATTG CTGAACAAGT AAGCCTTTCC CGCAGCGCCG TTGCAGAGCG AATTAAGAAA TTAGAACAGT CTGGAGTGAT CCGCGGTTAT CAAGTCCTTT TGAGCGAATC GCAAAAAGAA GGTGTATCGG CCTATTTTGA GATCCAACAC CAATGCTCAC GCTGCGCAGA CGTCGTGCAT GTCTTTCAAG CCATCCCTGA AGTCATTACA TGCCGTGGTA TTTCTGGGGA TATGGATTTA CTGGTTTATG TCCAAACGCC ATCAATGCGT CGTTTACATG AGATCCGTGA ATATATTGAT GCTCATTCCG ATATAACCAA GATTAAAACC CATATAGTGA TGAGTGAATG GATCAATAAT TTAGGCGAGT AA
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Protein sequence | MDKFDTAIIN CLRQNARQSV SHIAEQVSLS RSAVAERIKK LEQSGVIRGY QVLLSESQKE GVSAYFEIQH QCSRCADVVH VFQAIPEVIT CRGISGDMDL LVYVQTPSMR RLHEIREYID AHSDITKIKT HIVMSEWINN LGE
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