| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0269 |
|---|
| Symbol | |
|---|
| ID | 5081096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 287569 |
|---|
| End bp | 287919 |
|---|
| Gene Length | 351 bp |
|---|
| Protein Length | 116 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640497387 |
|---|
| Product | plastocyanin domain-containing protein |
|---|
| Protein accession | YP_001181802 |
|---|
| Protein GI | 146291378 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4633] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAATTA ATTTACTGTG TATCGCATTA ATCGGTTTTA TCATTTGGTG GTTTTGGCTA
TATAAACCGG CAAACGATTC TAGTGTTGAC GCTAGTACAT TGATACTGGT TAAAGACGGT
GTGTATACGC CAGCACGAAT TAAAATTTCG GCTAATAGAC CAACAGAGAT AACCTTTTTA
CGCCAAGATA AATCCGGATG TTCAGCCACT GTCTTGCTAC CCTACTTGGA GATTAGCCAA
GATTTAGCGC TGGATAAAAC GACGACGATA GCCTTACCGG CACTGGAAAA AGGTGAGTAT
CCATTTCATT GCCAGATGCA AATGTATAAG GGTGTATTGA TTGTTGAGTA A
|
|---|
| Protein sequence | MLINLLCIAL IGFIIWWFWL YKPANDSSVD ASTLILVKDG VYTPARIKIS ANRPTEITFL
RQDKSGCSAT VLLPYLEISQ DLALDKTTTI ALPALEKGEY PFHCQMQMYK GVLIVE
|
|---|
| |