Gene Sputcn32_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0217 
Symbol 
ID5079143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp236424 
End bp237026 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content44% 
IMG OID640497337 
Productphage integrase family protein 
Protein accessionYP_001181752 
Protein GI146291328 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACGT CACCGTGGAA CAAAGACTGT ATCATCGGTC AAAAAAGGCC GCTTCAGATA 
TCTCATATCT GGGGGATCCG GATTCGACTT GAGCTGGAAG GTAAAACACG CGATCTTGCA 
CTGTTCAACA TGGCTTTGGA CAGTAAGCTA CGAGGCTGTG ACCTGGTCAA ACTCAAAGTA 
TCAGATGTTG CATATGGCAG TTCTGTTTCA AGCAGAGCAA CGGTGTTGCA ACAGAAAACC 
GGTAGTCCTG TCCAATTTGA GATAACCAAA GGAACAAGAG AAGCTGTTGC TGCATTGATA 
AAGCTTGGTA ATTTGCATAG TAAAGACTTC TTGTTCCGGT CTCGGGTTGG TACTTGCCAA 
CACATATCAA CCCGGCAATA CAACCGAATT TTTCATGGGT GGATAGCAAA GCTTGGTCTC 
GAAAATTCAC TTTACAGCAC GCATTCTATG CGAAGAACAA AACCTTACCT GATCTACAAA 
AAAACTAAGA ATCTCAGAGT GATCCAACTC CTTCTGGGCT ACAAGAAACT GGAAAGTACA 
GTTCGATACT TGGGCATTGA AGTCGATGAT GCGCTGGAGA TATCTGAATC GATCGAAGTC 
TAA
 
Protein sequence
MKTSPWNKDC IIGQKRPLQI SHIWGIRIRL ELEGKTRDLA LFNMALDSKL RGCDLVKLKV 
SDVAYGSSVS SRATVLQQKT GSPVQFEITK GTREAVAALI KLGNLHSKDF LFRSRVGTCQ 
HISTRQYNRI FHGWIAKLGL ENSLYSTHSM RRTKPYLIYK KTKNLRVIQL LLGYKKLEST 
VRYLGIEVDD ALEISESIEV