| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0115 |
|---|
| Symbol | |
|---|
| ID | 5078890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 132749 |
|---|
| End bp | 133573 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640497235 |
|---|
| Product | DSBA oxidoreductase |
|---|
| Protein accession | YP_001181650 |
|---|
| Protein GI | 146291226 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1651] Protein-disulfide isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0538996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAT TTAACTCTTT ATTCAGCTCT TTATTAAAGA ATCGTAAGTT GCAGATGTTT
GCTGTCTCGG GTGTCGCCAT GGCAATGCTG GTGGTTTCCT TGCCTTCGCT GACGACCTCT
GCCCATGCCA AGGACAGCAG TTTATCGGCG GCGCAGCAGC AAGAAGTGCG AGCCATCGTT
AAAGATGCCT TGATTAATGA TCCGGACCTA ATGAGAGAAG CGATTCTTGC GTGGCAAGCT
AGGGAGCAAC AGGGCGCAGA TGCCGCAATG CAGGCTAGCT TAGCGAGTCA TCATCAAGCC
ATGTATGAAA CCAAAAGTGA CCCATGGAAG GGGGCTGCAA CGCCTGAGAT ATCTATGGTG
TATTTCACCG ATTTTAACTG TCCATACTGT AAGAAAATCG AACCTTCGCT GAACAAGTTG
ATTGAGGAGT TTCCGCAGTT GAAGATCATA ATCAAAATGG TGCCGCTGCA GGGCGAAGGC
TCCCAAATGG CGGTCGATTT TGCCCAAACG GTTTGGTTAA ACGAGCCAGA AAAGTATCTC
AAGGTGAAGG ATATGTTGAT GTCGAGTCCG CGTGGACTCG ATGCCGCCGC CATCGCTAAG
GTCGCTAAGC TGACGGACAC CGAGCGTTGG GTGGGCAATA CAGATGAGCG CGTGGCTAAA
ATGGTCGATG ACAATATTAA TTTAATGAAT TACTTAGGTA TAGGTGGCAC CCCAAGTATG
ATAGTGGCCG ATACGCTTAT TCCTGGATTA GTGCCTTACG AAGAGTTAAA AGCACAGCTT
GAAGCCGCGA TTGCCGCCAA AGATAAGACG CAGAAAATCC GTTAA
|
|---|
| Protein sequence | MSKFNSLFSS LLKNRKLQMF AVSGVAMAML VVSLPSLTTS AHAKDSSLSA AQQQEVRAIV
KDALINDPDL MREAILAWQA REQQGADAAM QASLASHHQA MYETKSDPWK GAATPEISMV
YFTDFNCPYC KKIEPSLNKL IEEFPQLKII IKMVPLQGEG SQMAVDFAQT VWLNEPEKYL
KVKDMLMSSP RGLDAAAIAK VAKLTDTERW VGNTDERVAK MVDDNINLMN YLGIGGTPSM
IVADTLIPGL VPYEELKAQL EAAIAAKDKT QKIR
|
|---|
| |