Gene Sputcn32_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0107 
Symbol 
ID5078882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp124135 
End bp125457 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content47% 
IMG OID640497227 
Productpeptidase M48, Ste24p 
Protein accessionYP_001181642 
Protein GI146291218 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACACG TTATGACCAC AGGGAACGAT AATCCCATCC AAATGGCCGA TACTGTTTAC 
TCGAAGGAAA AATCACTGTT CACCATATTA GCCATTATTT CAGGACTCGC CTGGGCAGGA
TTGATCATAG GCACTCTAGG TGCCGCGCTG CTTTATGTAT TGGCGTTTTT CATTATCTAT
CTCTTTAGCC ATTCCGCCTT TATCAGCTAC TTAAAAGGCA CCGCTGTTGC GATCAACGCA
GAGCAATTCC CTGATTTACA TAAACAATAT TTAGCCTGCT GCGAACGCTT AGAAATAAAA
GAACCACCAA GGGCCTACCT ACTCGCCGCC GACGGCATGC TCAATGCGTT GGCGACTCGC
TTTCTCGGCC GCAACTATAT AGTGCTATTT TCATCGATTG TAGATGCACT TGAGTCCGAT
AAAGATGCGC TCAACTTCTA TATCGGCCAC GAGCTAGGCC ATATTCGCCG CAATCATATA
GGTAAAGTGC CTTTTTTACT CTTCGCCACT TGGTTACCGT TAGTCGGCGC GGCTTATTCT
CGTGCCTGTG AATATACCTG CGATCTCCAC GGGTTACGTT GCTGCAATAG CTTACGTTCT
GCCACCAATG CGGTTGCTGT ATTAGCCGCA GGCGTCGAGC AATGGAAGCG TATGAATGTA
GACCAATATA TTCGCCAAAC CCAAGAATCG AGCGGTTTTT GGATGTCATT ACACGAGCTT
AATGGCAGCT ATCCTTGGTT AACTAAACGT ATGGCAAGAG TCCAAGCCAA GGCGCAGGGC
AAAGATTATG TGGCGCCTTC TCGCAGTGCA TGGGCTTATG TATTTAGCAT CTTTATGCCA
CGCTTAGGTA CAACGGGTGG TGGATTGATT ATCTTGGCTG CGATTATTGG CGTTGCGGCG
GCGATTGCCG TTCCGGCCTA TAAAGACTAT CAAGAAAAAA TGGGGGCGAG CATAAGCTAC
GATACGCCAA ACGATACACC AACATTGATG CTCACCGTTC CCGATGCATC ACTAGCAATG
GCACATATCG ACCAAAGACA TCAATCATTA ATACCCATCA CAGACACCTT AACCCGCTAT
TATCAAACCA ATAAGGCTTG GCCAACGGAA TTAGAAGTGC TTGGGTTAAC AGACGAACAA
CTGGAAACAT TTAACCTATA CACAGATGGT ATAGTGGGTT TTGTTGGGGG CGAAGCGCTC
GGGGATTACC AAGATTATGA GGTATACCTC TCACCTCAAG TCGATGAACA AAACAATATC
ACTTGGCTCT GCAGCAGTAA CGGTATTCCC GATGAATATC TGCCAGTAGA TTGCCGAGGT
TAA
 
Protein sequence
MEHVMTTGND NPIQMADTVY SKEKSLFTIL AIISGLAWAG LIIGTLGAAL LYVLAFFIIY 
LFSHSAFISY LKGTAVAINA EQFPDLHKQY LACCERLEIK EPPRAYLLAA DGMLNALATR
FLGRNYIVLF SSIVDALESD KDALNFYIGH ELGHIRRNHI GKVPFLLFAT WLPLVGAAYS
RACEYTCDLH GLRCCNSLRS ATNAVAVLAA GVEQWKRMNV DQYIRQTQES SGFWMSLHEL
NGSYPWLTKR MARVQAKAQG KDYVAPSRSA WAYVFSIFMP RLGTTGGGLI ILAAIIGVAA
AIAVPAYKDY QEKMGASISY DTPNDTPTLM LTVPDASLAM AHIDQRHQSL IPITDTLTRY
YQTNKAWPTE LEVLGLTDEQ LETFNLYTDG IVGFVGGEAL GDYQDYEVYL SPQVDEQNNI
TWLCSSNGIP DEYLPVDCRG