| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_3926 |
|---|
| Symbol | |
|---|
| ID | 5111578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | - |
|---|
| Start bp | 4238781 |
|---|
| End bp | 4240754 |
|---|
| Gene Length | 1974 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640494135 |
|---|
| Product | putative phosphodiesterase |
|---|
| Protein accession | YP_001178632 |
|---|
| Protein GI | 229577501 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGG TATCTGCCGT CACTATGGTG TTTGTTTTCA TATTTTGCGT TATTTTGCTG
TTTCATTCCG TACAGCAGAA TCGCTACAAC ACGGCTTCAC AACTGGAAAG TATCGCCCGC
TCGGTTCGTT TACCGCTCTC GGCCGCCATT CTGAAAGGGG ATATCCCCGA GGCAGAAACC
ATTTTACAGC GCATTCAACC TGCAGGAATT GTCAGCCGGG CGGATGTGGT GTTACCCAAT
CAATTCCAGG CGCTGCGGAT GAGCTTTATT CCCGAGCGTC CGGTTCCGAT GATGATCATG
CGGATGTTTG AGCTGCCGGT GCAGATTTCG CTCCCGCTTT ACTCCCTTGA ACGCCCTGCC
AATCCGCAGC CGTTAGCCTA TTTGGTTCTA CAGGCGGACG CGTATCGGAT GCACAAGTTC
GTGATGAGCT GGGTCTCGAC GTTAGTAACT ACTTACTTAC TTTTAACGCT GATTCTGAGC
GTGGCGCTGA CCTGGTGTAT CAACCGTTTG ATTGTCCATC CGCTGCGCAA AATTGCCCGT
GAGCTGGATA ATCTCTCGCC GCAGGACCAG GTGGGACATC AGCTTTCCCT GCCGCGCCTG
CATCATGACG ACGAAATCGG CATGCTGGTG CGCAGTTACA ACATTAACCA GCAGCGCTTG
CTGCGCCACC AGGATGAGCT TAACAGCAAC GCCACGCGTT TCCCGGTCTC TGAGCTGCCA
AACAAAGCCT TCCTGATGGC GTTACTGGAA CAAACCGTCG CGCGTCAGCA GACCACGGCG
CTGATGGCTA TCGCCTGTGA AACCTTGCAG GACACGGCCG GCGTGCTGAA AGAGAGTCAG
CGCGAAATGC TGCTCCTGAC GCTGGTGGAA AAAATCAAAT CGGTGCTCGC GCCACGAATG
GTCCTCACCC AAGTGAGCGG CTACGATTTT GTGATTCTCG CCCACGGAGT GAAAGAGCCG
TGGCACGCCA TCACGTTAGG TCAGCAAGTG CTCACTGTCA TAAATGAGCG TCTGCCGGTG
CAGGGCATTC AGCTGCGTCC GAGCGCCAGT ATCGGTCTGG CGATGTATTA CGGCGATCTG
ACGGCAGAAC AGCTGTATCG ACGTGCGTTC TCCGCGGCCT TTACCGCCCG TCGCAAAGGC
AAAAATCAGA TTCAGTTCTT CGAACCGGAG CAGATGGAAA AGGCGCAGCG GCGGTTGACG
GAAGAGAGCG ATATTCTCAC CGCGCTGGAT AATAATCAGT TCGCGCTTTG GCTCCAGCCG
CAGGTCAATC TTGAAACGGG CGAAGTGAAA AGCGCCGAAG CGCTGTTACG CGTCCAACAG
CCGGATGGTT CGTGGGAGCT GCCCGAAGGG CTGATTGAGC GGATTGAATC CTGTGGGCTG
ATGGTGACAG TGGGTTATTG GGTGCTGGAA GAGTCGTGCC GTCAGCTTTC TGCCTGGCAG
GAACGCGGCA TCGAGATGCC GCTGTCGGTC AACCTTTCTG CTTTACAGCT GATGCACCCG
ACGATGGTGT CGGAGATGCT GGAGCTGATC AATCGCTACC GGATCAAGCC CGACACGTTG
ACCCTCGAAG TCACAGAAAG CCGTCGTATT GACGACCCAA ATGAAGCGGT GGCGATTCTG
AAACCACTGC GTAATGCCGG GATTCGCATT GCGCTGGATG ATTTTGGCAT GGGCTACGCG
GGGCTGCGCC AGCTCCAGCA CATGAAAACG CTGCCCGTCG ACGTACTGAA GATCGACAAG
ACTTTTGTTG ACGGTCTGCC AGACGACAGC AGCATGGTTG AAGCCATTAT TCAGATGGCG
CGCAGCCTTG ATTTGCATGT GATCGCTGAA GGTGTCGAAA CGGAAGCCCA GCGCGACTGG
CTGGCGAAGG CGGGTGTCGA AAGTGGTCAG GGCTTCTTAT TTGCTCGCGC CGTGCCGCCT
GATGAATTTG AAAAACGTTA TCTCACAGCC GAAAACACGC CCGCAAAAGT GTAA
|
|---|
| Protein sequence | MAMVSAVTMV FVFIFCVILL FHSVQQNRYN TASQLESIAR SVRLPLSAAI LKGDIPEAET
ILQRIQPAGI VSRADVVLPN QFQALRMSFI PERPVPMMIM RMFELPVQIS LPLYSLERPA
NPQPLAYLVL QADAYRMHKF VMSWVSTLVT TYLLLTLILS VALTWCINRL IVHPLRKIAR
ELDNLSPQDQ VGHQLSLPRL HHDDEIGMLV RSYNINQQRL LRHQDELNSN ATRFPVSELP
NKAFLMALLE QTVARQQTTA LMAIACETLQ DTAGVLKESQ REMLLLTLVE KIKSVLAPRM
VLTQVSGYDF VILAHGVKEP WHAITLGQQV LTVINERLPV QGIQLRPSAS IGLAMYYGDL
TAEQLYRRAF SAAFTARRKG KNQIQFFEPE QMEKAQRRLT EESDILTALD NNQFALWLQP
QVNLETGEVK SAEALLRVQQ PDGSWELPEG LIERIESCGL MVTVGYWVLE ESCRQLSAWQ
ERGIEMPLSV NLSALQLMHP TMVSEMLELI NRYRIKPDTL TLEVTESRRI DDPNEAVAIL
KPLRNAGIRI ALDDFGMGYA GLRQLQHMKT LPVDVLKIDK TFVDGLPDDS SMVEAIIQMA
RSLDLHVIAE GVETEAQRDW LAKAGVESGQ GFLFARAVPP DEFEKRYLTA ENTPAKV
|
|---|
| |