Gene Rsph17025_4330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4330 
Symbol 
ID5086506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009431 
Strand
Start bp86291 
End bp87430 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content74% 
IMG OID640485886 
Producthypothetical protein 
Protein accessionYP_001170480 
Protein GI146280324 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.187402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC GCCGCCTGTC CCCCGAAACG CTCGCCGCGC AGGCGCTCGG GCACGTCGAT 
GGCGCGACCG GGGCGCTGAT CCCCTCGATC CATCCCTCGA CCACCTACGA GCGCGACGCC
GACACCGGCT ATTCCCGCGG CCGCGTCTAC GCCCGCGCCG ACAATCCCAC CTTCGACACG
CCCGCCGATC TGCTGACGCG GCTCGAGGGC GGGGCCGAGA CCCTGCTCTT CTCCTCGGGC
ATGGCGGCGG CGACGGCGGT CTTCCTCGCG CTGGCGCCCG GCGATCATGT GCTGGCGCCG
CGGGTGATGT ACTGGGCCCT GCGCGGATGG CTGCTCGATT TCGCCACCCG CTGGGGGATC
GAGGTCGAGC TGGTGGACAC GTCCGACCTC GAGGCGCTGG CGGCGGCGGT GCGGCCGGGC
CGGACGCGGC TGATCTGGCT CGAGACGCCC GCCAACCCGA CGTGGGAGGT GGCCGACATC
GCCGCCGTGG CCGACATCGC CCGCGCCGCC GGGGCGCGTC TGGCGGTGGA TTCCACCGTG
GCCACCCCCG TCCTGACCCG CCCGCTGGAG CTGGGGGCCG ATCTCGTCAT GCATTCGGCC
ACCAAATATC TCAACGGCCA CACCGACGTG GTGGCGGGCA CCCTGACCTG CGCGCAGCGG
GATGACTCCT GGGCCCGGAT CGCCGCGGTC CAGCGCCAGA ACGGCGCGAT CCTCGGCCCG
TTCGAGGCGT GGTTGCTGCA GCGCGGCATG CGCACGCTCT ATCCCCGGTT GCGCTGGCAA
TGCGCCTCGG CGGCGGCGCT GGCCGAGCGG CTGGCCGCCC ATCCGCGCGT GGCCGAGGTG
CTCTATCCCG GTCTCGCCTC GCATCCGGGC CACGCCATCG CGCGGCGCCA GATGCAGGGC
GGCTTCGGCG GGATGCTCTC GGTCCGCGTC GCGGGAGGTC GCGAGGCCGC CATCGCCACC
GCCGCACGGG TCAGGCTCTG GACCCGCGCG ACCTCGCTCG GCGGGGTGGA AAGCCTGATC
GAGCACCGCG CCAGCATCGA GGGCCCGACC TCGCCGGTCC CCGACGACCT GCTGCGCCTG
TCGGTCGGGC TGGAGGCGGC CGAGGATCTC TGGGACGACC TCGCCACCGC CCTGGGCTGA
 
Protein sequence
MTERRLSPET LAAQALGHVD GATGALIPSI HPSTTYERDA DTGYSRGRVY ARADNPTFDT 
PADLLTRLEG GAETLLFSSG MAAATAVFLA LAPGDHVLAP RVMYWALRGW LLDFATRWGI
EVELVDTSDL EALAAAVRPG RTRLIWLETP ANPTWEVADI AAVADIARAA GARLAVDSTV
ATPVLTRPLE LGADLVMHSA TKYLNGHTDV VAGTLTCAQR DDSWARIAAV QRQNGAILGP
FEAWLLQRGM RTLYPRLRWQ CASAAALAER LAAHPRVAEV LYPGLASHPG HAIARRQMQG
GFGGMLSVRV AGGREAAIAT AARVRLWTRA TSLGGVESLI EHRASIEGPT SPVPDDLLRL
SVGLEAAEDL WDDLATALG