Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4283 |
Symbol | |
ID | 5086461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009431 |
Strand | - |
Start bp | 46176 |
End bp | 46604 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640485841 |
Product | hypothetical protein |
Protein accession | YP_001170435 |
Protein GI | 146280279 |
COG category | [R] General function prediction only |
COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.171315 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACGG ACAAGGACGA ATGCGGGTCC CCCTCGGATC CGGGCGACCG ACGAAGTCGG CCGCCGAAGG AACGGCGGCG GCGGTCGGGA ATCCTGCAGG AGTTTGCACA GGACGGCACG CGTGACCGCG TGTCTGTGGC AGATCTGCTC CGGATCCTGG ACGCACGGGC CTCCGGGGCA TCGCGGCTCA TCTTTGCCCT GCCGAGCGTG CTGCCGACCC CGCCCGGAAC TTCTGGCCTC CTGGGTCTTC CTCTTGTCTG TCTCTCCAGC CAACTCATGC TCGGCCAGCG GCCCTGGCAG CCGCGCTTCG ATGCCGAAAG ATCTCTGGCG CGTGCGGATT TCTCCGCGCT GGTCGAGCGT GTCCTGCCGA TCCTGAACGG GCGCGCCACG TGCGTCTGCT GCCCCAAGAG GTTGAGAGAT GTATCTTGA
|
Protein sequence | MSTDKDECGS PSDPGDRRSR PPKERRRRSG ILQEFAQDGT RDRVSVADLL RILDARASGA SRLIFALPSV LPTPPGTSGL LGLPLVCLSS QLMLGQRPWQ PRFDAERSLA RADFSALVER VLPILNGRAT CVCCPKRLRD VS
|
| |