Gene Rsph17025_4283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4283 
Symbol 
ID5086461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009431 
Strand
Start bp46176 
End bp46604 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID640485841 
Producthypothetical protein 
Protein accessionYP_001170435 
Protein GI146280279 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.171315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGG ACAAGGACGA ATGCGGGTCC CCCTCGGATC CGGGCGACCG ACGAAGTCGG 
CCGCCGAAGG AACGGCGGCG GCGGTCGGGA ATCCTGCAGG AGTTTGCACA GGACGGCACG
CGTGACCGCG TGTCTGTGGC AGATCTGCTC CGGATCCTGG ACGCACGGGC CTCCGGGGCA
TCGCGGCTCA TCTTTGCCCT GCCGAGCGTG CTGCCGACCC CGCCCGGAAC TTCTGGCCTC
CTGGGTCTTC CTCTTGTCTG TCTCTCCAGC CAACTCATGC TCGGCCAGCG GCCCTGGCAG
CCGCGCTTCG ATGCCGAAAG ATCTCTGGCG CGTGCGGATT TCTCCGCGCT GGTCGAGCGT
GTCCTGCCGA TCCTGAACGG GCGCGCCACG TGCGTCTGCT GCCCCAAGAG GTTGAGAGAT
GTATCTTGA
 
Protein sequence
MSTDKDECGS PSDPGDRRSR PPKERRRRSG ILQEFAQDGT RDRVSVADLL RILDARASGA 
SRLIFALPSV LPTPPGTSGL LGLPLVCLSS QLMLGQRPWQ PRFDAERSLA RADFSALVER
VLPILNGRAT CVCCPKRLRD VS