Gene Rsph17025_4241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4241 
Symbol 
ID5086412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp284982 
End bp285989 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content70% 
IMG OID640485802 
Producthypothetical protein 
Protein accessionYP_001170396 
Protein GI146280239 
COG category[L] Replication, recombination and repair 
COG ID[COG5534] Plasmid replication initiator protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.779681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGCCG GGCGCAGGGC CACCCCCGCG GCGCGCCCCC CCGAGACCGC GGACTTCTTC 
ATCTGCGACA TCCTTGATGC GCTGCCCAAG GACGACATGG CCTCGATGGA GCATCCGGTC
TTTTCGCTGG CCACAAGGCC CGACCTGCGG GTGCTCGACT ATTCCCACAA CGGGGTCCGG
ATCACGGTGA CGCCTTCGGT GCGCGGCCTC GCCACGCTCT TCGACAAGGA CATCCTGATC
TACTGCATCA GCCAGCTCAT GGCCGCGCTG AACGCCGGGC GCGCCATCAG CCGCACGCTG
CACCTGACCG CACACGACCT GATGACGGCC ACCCACCGCG AGACCAGCGG TGACGGCTAC
CAGCGCCTGC GCGAGGCGTT CGAGCGGCTG GCGGGCACCC GCATCACCAC CAACATCGAG
CAGGGAGGCC GCGAGATCAC CACGGGCTTC GGCCTGATCG AGAGCTGGCA GATCGTGCGC
CGCTCGCGCG GGGGGCGCAT GGTGCAGGTG ATGGTCACCC TCTCGGAATG GCTGTTCCAA
GCGGTGCTGT CGAAATCGGT CCTCACGCTC AGCCGCGATT ACTTCCGGCT GAGAAAGCCG
CTCGAGCGGC GGATCTATGA ACTCGCGCGC AAGCATTGCG GCCACCAGCC GGAATGGCGG
GTCTCGATCG CGACGCTGGC CAAGAAGTCG GGCTCGGCCT CGCCGCTTCG GGTCTTCCGC
AAGATGATCC GCGACATGAT CGGGGCGAAT GCGCTGCCGG GCTATCTTCT GGCCGAGGAG
CCGGGCGACA TCCTCTGCGT CACCCGGCGC GAGGCGGTGC TGGCGCCGGG CCTCGCCCCC
GCCCTGCGCG AGGCGACGCT CGAGCGGGTG CGCGCCCTGA TGCCGGGCTG GGACGTCCAT
GCGCTGGTGG CCGAGTGGCA GTCCTTCTGG AACCGCACCG GCCAGCCCCG GCTGAGATCG
GCCGACGCCG CCTTCCTCGG CTGGATCGAG CGCCGGGCGG CGGGGTAA
 
Protein sequence
MAAGRRATPA ARPPETADFF ICDILDALPK DDMASMEHPV FSLATRPDLR VLDYSHNGVR 
ITVTPSVRGL ATLFDKDILI YCISQLMAAL NAGRAISRTL HLTAHDLMTA THRETSGDGY
QRLREAFERL AGTRITTNIE QGGREITTGF GLIESWQIVR RSRGGRMVQV MVTLSEWLFQ
AVLSKSVLTL SRDYFRLRKP LERRIYELAR KHCGHQPEWR VSIATLAKKS GSASPLRVFR
KMIRDMIGAN ALPGYLLAEE PGDILCVTRR EAVLAPGLAP ALREATLERV RALMPGWDVH
ALVAEWQSFW NRTGQPRLRS ADAAFLGWIE RRAAG