Gene Rsph17025_4108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4108 
Symbol 
ID5086281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp161393 
End bp162433 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content63% 
IMG OID640485671 
Producthypothetical protein 
Protein accessionYP_001170265 
Protein GI146280108 
COG category[S] Function unknown 
COG ID[COG5397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.15016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTCC CCTTACCTCT GCAGACGACC TACCAGGAGC TTCAGCAACT GCATTCGGTC 
ATGCCGACCC CCTCGATCGA AGGCTCCATC CTGAAGCGCA CCAAAGGGGA CAATCATTAC
TGGGTCGCCC GCAAGCGGGC CGGCAAGAAC GTCCTCGAGA CGGCAATCGG ACCCGACACC
GAAGAGATCA GGGCCAGGAT CGAGAAGGCT GGCAAGGAAC AGGCGGCCCT GAAACTCTGG
ACGCGTTCGG CCTCGGCCTG TGTCGCCACG CTCCAGGCGG GTCGCTGTCT TGCACCTGAC
ATGACCACCG GCAAGCTGCT TGCCGCCATC GCGAAGACCG GGTTCTTCAC GGCCGGAGGC
ATCCTTGGGG GAACCCAGGC GTTTCGCCAT TACCCGTTGA TGCTGTCTGT CGATCCACCC
TCGACAGCCT TCTCGATGAC CGGAGATGTC GACTTGATCG CGGCGAACAG CGTGAAGCTT
GCCGGCGGAT CCTCAGGCGA TCCGAAAGGG CTTGCGTTGC GCCTGCAGAA ACTCGGCATC
GAGATGGAGG TGGTCTTTGG AATGAGTGAA GATCAACCTC CCAAATGGGT CATCGGAGGT
ACGATCGAAC TCGAATTCCT CTCCTCGATG AGCCGGGACG GCGAGCCAAG ACGCAGGCAC
GCAGGCATCG GCGAGTCCGT TCAGGCTCTC AGGCATCTCG AGTTCACCTT CGATGGCTCG
CGCGACGCTG TCTCGCTCTA TCGCTCGGGC GTACCGATCA AGGTCCCTGC GCCAGAGCGA
TACGCCCTGC ACAAGCTGAT CGTCGCCCAG TTGCGCAGCG GGACATTCCG GGAAAAACGC
CGCAAGGACC TCGACCAGGC CAGCTGGCTG CTCTCCGTCC TCTCCGAGCG ACGCGCCTAC
GAATTGTGGT CGGCGTGGGA CGACCTCTGC CGCCGCGGGC GAAAGTGGCG TGAGCGGGTG
GATGCCTCGC TCGAAGAGCG TCCCGATGCC CGGGCAAGCC TCGACCTTGT CGAAGACGAG
TTCGGGCCTC CCGCATCCTG A
 
Protein sequence
MDLPLPLQTT YQELQQLHSV MPTPSIEGSI LKRTKGDNHY WVARKRAGKN VLETAIGPDT 
EEIRARIEKA GKEQAALKLW TRSASACVAT LQAGRCLAPD MTTGKLLAAI AKTGFFTAGG
ILGGTQAFRH YPLMLSVDPP STAFSMTGDV DLIAANSVKL AGGSSGDPKG LALRLQKLGI
EMEVVFGMSE DQPPKWVIGG TIELEFLSSM SRDGEPRRRH AGIGESVQAL RHLEFTFDGS
RDAVSLYRSG VPIKVPAPER YALHKLIVAQ LRSGTFREKR RKDLDQASWL LSVLSERRAY
ELWSAWDDLC RRGRKWRERV DASLEERPDA RASLDLVEDE FGPPAS