Gene Rsph17025_4094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4094 
Symbol 
ID5086267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp144719 
End bp145168 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content71% 
IMG OID640485657 
Producthypothetical protein 
Protein accessionYP_001170251 
Protein GI146280094 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0414823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGGTTC AGTCCGTCCT CGTGGTCTGC GTCGGCAACA TCTGCCGCTC GCCCACCGGC 
GAGCGGCTTC TGCGGGCGCG GCTGCCGGAT CTGCGGGTCG AGTCCGCGGG GCTGGCCGCG
CTGGTGGGAA GTGCCGCGGA CGGGCGTTCG GCGGCGGTGG CCGAGGCGCA GGGGCTGTCG
CTTGCGGGCC ATGTGGCGCG GCAGTTCACG CCGGCGATGG GGACGGGGTT CGATCTCATT
CTCGTGATGG AGACGGCGCA CCGGGCCCGG ATCGCCCGGA TGGCGCCGCA GCTTCTCGGG
CGGACGATGC TCTTTGACCA CTGGACGGGA AGTCGCGGGA TCCCCGATCC CTACGGCCGC
CTGGCCGAGG TGTACGAGAG CACGTTTTCA CGATTGTCCG CGGCGGCCGA TGCCTGGTCG
GCCCGGTTGC GCAAGAGGGT TGACGGATGA
 
Protein sequence
MEVQSVLVVC VGNICRSPTG ERLLRARLPD LRVESAGLAA LVGSAADGRS AAVAEAQGLS 
LAGHVARQFT PAMGTGFDLI LVMETAHRAR IARMAPQLLG RTMLFDHWTG SRGIPDPYGR
LAEVYESTFS RLSAAADAWS ARLRKRVDG