Gene Rsph17025_4030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_4030 
Symbol 
ID5086203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009430 
Strand
Start bp64350 
End bp65135 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content72% 
IMG OID640485593 
Productbeta strand repeat-containing protein 
Protein accessionYP_001170187 
Protein GI146280030 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1858] Cytochrome c peroxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.56373 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCCTCA CCTTGGCGCC GCCCGTGGCG GCCGATCCCG ACTTCATCGC CCGGGCGCTA 
CCCTTCGTTC TGACCGAGTA TGCGGTGCCG CCGCCCGATC CCTCGAACCG CTGGCAGGGC
AATCCGGCGG CCGAGGCGCT CGGGCGGTCG CTCTTCCTCG ACCCGCGGCT CAGCCGGTCG
GGCGAGCTGT CTTGTGCGAG CTGCCATGTC ACCGGCGGCC GGCTCGTACC GAACGAGAGC
TGGCCCGCGG ACGCCGACCG GCAGTTTCGC ACGGTGATGC CAGTGGCCGG CGCGGCCTTC
CAAGACTTCT TCTTCTGGGA CGGGCGGAAG GACAGCCTCT GGAGCCAAGC ACTCGCACCG
CTCGAGACGA CGAGCGAGCA TGGCCTCACC CGCACCGAAG TGGCAGCCCG GCTCGTGCGC
TGGCATGGGC ATGAGGTCGC GACGCTAACC GGCGCGGCCC TGCCCTCCGT TGAGGCACTG
GAGGCATTGC CGCCCGCCTC GCCTGTCGGT ACTCGCACCG AGCGGCGCGC CTGGCGCGCA
CTCGATCCGG CTGCCCGCTC CAAGGTGACG GAGCTTTTCG TGCTGACGGG AAAGCTCATC
GCGGCATTCG AGGCGGGCCT GCCGCCGCCG CGCAGCGCCT GGGACTGGAT CCTCACAGCC
GCGCAGCGGG ATGCTTCCGT GCTTGCGGCG CTGCCCGCCC CGGCCCGCCG CGGCTTCGAC
CTCTTCACCG GCCGGGCACG CTGCGCGAGC TTCAGCTCGT TCTGCACGAT CAGCGCCAGC
GCCTGA
 
Protein sequence
MGLTLAPPVA ADPDFIARAL PFVLTEYAVP PPDPSNRWQG NPAAEALGRS LFLDPRLSRS 
GELSCASCHV TGGRLVPNES WPADADRQFR TVMPVAGAAF QDFFFWDGRK DSLWSQALAP
LETTSEHGLT RTEVAARLVR WHGHEVATLT GAALPSVEAL EALPPASPVG TRTERRAWRA
LDPAARSKVT ELFVLTGKLI AAFEAGLPPP RSAWDWILTA AQRDASVLAA LPAPARRGFD
LFTGRARCAS FSSFCTISAS A