Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_4030 |
Symbol | |
ID | 5086203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009430 |
Strand | - |
Start bp | 64350 |
End bp | 65135 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640485593 |
Product | beta strand repeat-containing protein |
Protein accession | YP_001170187 |
Protein GI | 146280030 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1858] Cytochrome c peroxidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.56373 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGGCCTCA CCTTGGCGCC GCCCGTGGCG GCCGATCCCG ACTTCATCGC CCGGGCGCTA CCCTTCGTTC TGACCGAGTA TGCGGTGCCG CCGCCCGATC CCTCGAACCG CTGGCAGGGC AATCCGGCGG CCGAGGCGCT CGGGCGGTCG CTCTTCCTCG ACCCGCGGCT CAGCCGGTCG GGCGAGCTGT CTTGTGCGAG CTGCCATGTC ACCGGCGGCC GGCTCGTACC GAACGAGAGC TGGCCCGCGG ACGCCGACCG GCAGTTTCGC ACGGTGATGC CAGTGGCCGG CGCGGCCTTC CAAGACTTCT TCTTCTGGGA CGGGCGGAAG GACAGCCTCT GGAGCCAAGC ACTCGCACCG CTCGAGACGA CGAGCGAGCA TGGCCTCACC CGCACCGAAG TGGCAGCCCG GCTCGTGCGC TGGCATGGGC ATGAGGTCGC GACGCTAACC GGCGCGGCCC TGCCCTCCGT TGAGGCACTG GAGGCATTGC CGCCCGCCTC GCCTGTCGGT ACTCGCACCG AGCGGCGCGC CTGGCGCGCA CTCGATCCGG CTGCCCGCTC CAAGGTGACG GAGCTTTTCG TGCTGACGGG AAAGCTCATC GCGGCATTCG AGGCGGGCCT GCCGCCGCCG CGCAGCGCCT GGGACTGGAT CCTCACAGCC GCGCAGCGGG ATGCTTCCGT GCTTGCGGCG CTGCCCGCCC CGGCCCGCCG CGGCTTCGAC CTCTTCACCG GCCGGGCACG CTGCGCGAGC TTCAGCTCGT TCTGCACGAT CAGCGCCAGC GCCTGA
|
Protein sequence | MGLTLAPPVA ADPDFIARAL PFVLTEYAVP PPDPSNRWQG NPAAEALGRS LFLDPRLSRS GELSCASCHV TGGRLVPNES WPADADRQFR TVMPVAGAAF QDFFFWDGRK DSLWSQALAP LETTSEHGLT RTEVAARLVR WHGHEVATLT GAALPSVEAL EALPPASPVG TRTERRAWRA LDPAARSKVT ELFVLTGKLI AAFEAGLPPP RSAWDWILTA AQRDASVLAA LPAPARRGFD LFTGRARCAS FSSFCTISAS A
|
| |