| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3971 |
|---|
| Symbol | |
|---|
| ID | 5086147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | - |
|---|
| Start bp | 877193 |
|---|
| End bp | 877867 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640485530 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001170130 |
|---|
| Protein GI | 146279972 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.139394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC TGCTTGCCGA GGACGACAGC CAGACCGCCG CCTACCTCCG GCAGGGCCTC
TCCGCCGAGG GATACAGCGT GGATCATGTG CCCGACGGCC GCGACGCGCT GGTGCAGGCG
ACGCTGCAAC CCTACGACCT GCTGGTGATC GACCGGATGA TGCCGGGGCT GGACGGGCTG
TCGCTGGTCA AGGCCCTGCG CAGCGCGCAG GTCAAGGCCC CCATCCTGAT CCTGACGGCG
ATGGGGGGCG TGACGGACCG GGTCGAGGGG CTTCAGGCGG GGGCCGACGA CTACCTTGTG
AAGCCCTTCG CCTTCTCGGA GCTTTCGGCG CGGCTTGCGG CGCTTGCCCG GCGCCCGGCC
CTTGCCGAGA CCAGCCGCGA CGTGCTGCGC GTGGGCGATC TCACGCTCGA CACGACGCGC
CGCACCGCAA CCCGCGGCGG CGCCGAGATC GACCTTCAGC CGCGCGAGTT CCGCCTGCTC
GAGCATCTGA TGCGCTCGGC GGGGCGGGTG CAGACCCGGA CGATGCTGCT CGAGGCGGTC
TGGGACTTTC ACTTCGATCC CGGCACCAGC GTGGTCGAGA CGCATATCAG CCGGCTGCGC
GCCAAGATCG ACCGGCCCTT CGAGAAACCG CTCCTCCATA CGGTCCGCGG GGCGGGCTAC
ATGCTGAAGG CATGA
|
|---|
| Protein sequence | MKILLAEDDS QTAAYLRQGL SAEGYSVDHV PDGRDALVQA TLQPYDLLVI DRMMPGLDGL
SLVKALRSAQ VKAPILILTA MGGVTDRVEG LQAGADDYLV KPFAFSELSA RLAALARRPA
LAETSRDVLR VGDLTLDTTR RTATRGGAEI DLQPREFRLL EHLMRSAGRV QTRTMLLEAV
WDFHFDPGTS VVETHISRLR AKIDRPFEKP LLHTVRGAGY MLKA
|
|---|
| |