| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3902 |
|---|
| Symbol | |
|---|
| ID | 5085450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 800666 |
|---|
| End bp | 801559 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640485461 |
|---|
| Product | ABC-type branched-chain amino acid transport system permease component-like protein |
|---|
| Protein accession | YP_001170062 |
|---|
| Protein GI | 146279904 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.83606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.194602 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGTG CCAGCCCGAT GACCATCATC TTCCTGTCGC ATCTCCTGAA CGGCCTGCTC
GACGGCTTCT ACTACATGCT CATCGCGCTC GGCCTGTCGC TGATCTTCTC GCTCGGCGGG
ATCGTGAACC TTGCGCATGG CGCCTTCTTC ACGCTGGGGG CCTATCTCGC CTTCGTGCTG
ACGCCCATGC TCGGATTCTT CGGGGCGCTG ATCGTGGCGC CGCTGGTCGC CGCGGCCCTG
GCCGTCGTGG TCGAGCGGTT CCTCTTCACC CGGTTCTACC GCGAGGATCC GCTCTATTCG
CTGCTGCTGA CCTTCGGCAT GGCGATGATC ATCGAGCAGA GCCTTCGTTG GTATTTCGGC
GCGACGCCGC GCGCCTATTC CATGCCCGAT ATCCTGCGCG GGCAGGTGTT CATGGGCGAC
TTCGTCTATT CCCGCTATCG GCTGTTCCTG ATCGCGGTGG CCATCGTCAC GGTCGCGGGG
GTCTGGGTTC TCCTGAACCG GACGGCCTTC GGCCGGATCG TCCGGGCGGG GATCCAGAAC
CCCGACATCC TCGGCACGCT CGGGATCTCG CTCCGGCCCT ATCTCTCGAC CGTGGTGGCG
CTTGCCATCG GGATCGCGGC GCTGGCGGGG GTGCTCATGG CGCCGATCCA GCCCGTCCAT
CCGATGATGG GGGTCGAGGT CGGCACGGCG GCCTTCGTCG TCGTCATCAT CGGCGGGCTC
GGCTCGTTCT GGGGTGTGGT GATCGCGGCG CTGCTCGTCG GGCTCGTCAA GGGCGCGATC
ATCGGCATCG GCCTGTCGCA GTACTCGATG CTCGCGATCT ACCTGCTGAT GTTCGTCGTC
CTGCTGCTGC GCCCGCGAGG CCTGCTGGGC GAGCGGATCA CCCGTTTCGA ATAG
|
|---|
| Protein sequence | MDRASPMTII FLSHLLNGLL DGFYYMLIAL GLSLIFSLGG IVNLAHGAFF TLGAYLAFVL
TPMLGFFGAL IVAPLVAAAL AVVVERFLFT RFYREDPLYS LLLTFGMAMI IEQSLRWYFG
ATPRAYSMPD ILRGQVFMGD FVYSRYRLFL IAVAIVTVAG VWVLLNRTAF GRIVRAGIQN
PDILGTLGIS LRPYLSTVVA LAIGIAALAG VLMAPIQPVH PMMGVEVGTA AFVVVIIGGL
GSFWGVVIAA LLVGLVKGAI IGIGLSQYSM LAIYLLMFVV LLLRPRGLLG ERITRFE
|
|---|
| |