Gene Rsph17025_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3672 
Symbol 
ID5085532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp567520 
End bp568287 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content75% 
IMG OID640485230 
Producthypothetical protein 
Protein accessionYP_001169845 
Protein GI146279687 
COG category[K] Transcription 
COG ID[COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.671386 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATC CGGTGACCGA GCTCGACCTG GTGGCCTATG TCGATGACCA GCTCGACCCC 
TGGCGGCGCG TGGCGGTGGA GGCTCATCTA GCGGCCGATC CGAGCGCCGC CGCACGGGTG
ATGGCCGACC TGCGCGCGCG CGACGAGCTG CGGCTCGCCT TCGCGGATCC GCTGCCGCAC
GAGGCGCCCG AGACGCGGGC CGCCGCACGG AAGCTCGCCC GCGGGCTGGG CCTCGACCGG
CTGCTGGTGC GGCTGGCGCC GATGGCGGCG GTCCTGGTGC TGGGCGGCCT GATCGGGGCC
GGCGCCGCGG GGCTCGGCCC GTTGCGCGTG TCGCATGTGG TGGCGTCCGA GCCGCCGCCC
GCCTTCATCC AGACCGCGCT TGAGGCGCAT GAGGCGGGCC GGCTGCGTCT GTCGATGCTG
TCTCAGCCCG CGGCAACGCG CCTCGACGCG GCCGAGATCC GCGCCAAGAC CGGGATCCTG
CTGCCCGGCC TGCCCGCCGA CTGGCAGGTG CAGGACGTGC AGATCTTCCC GTCGCCTCAG
GGCCCGAGCG TCGAGATGGC GCTCGAGACG CCGGGGCTGG GGCGGCTGTC GCTCTTTGCG
GTGCGGCCCG GCAGCTTCCG GGTCGCGCTG CCCGACGCAA CCCAGGCCGG CGGCCGCGAT
GTCGCCTGGT TCCAGATCGG CGAGGTGGCC CATGTCCTCG TGGCAGAGGC CGCCCCGCCC
GACGCGCTGC GTGAGGCGGC CGACGGCCTC TCGCGCACAC TTTACTGA
 
Protein sequence
MPDPVTELDL VAYVDDQLDP WRRVAVEAHL AADPSAAARV MADLRARDEL RLAFADPLPH 
EAPETRAAAR KLARGLGLDR LLVRLAPMAA VLVLGGLIGA GAAGLGPLRV SHVVASEPPP
AFIQTALEAH EAGRLRLSML SQPAATRLDA AEIRAKTGIL LPGLPADWQV QDVQIFPSPQ
GPSVEMALET PGLGRLSLFA VRPGSFRVAL PDATQAGGRD VAWFQIGEVA HVLVAEAAPP
DALREAADGL SRTLY