| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3654 |
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| Symbol | |
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| ID | 5085514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 543162 |
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| End bp | 544457 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640485212 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_001169827 |
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| Protein GI | 146279669 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.109042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCGA GACAGCGCAT CAGTATCGCC CAGACGCAGC GGTTGCAGCT GAACCTCGGT
TTGACCGCCT CGATCCGAAT CCTCAGCTCG GACGCCGAGG GCCTGACCCG GTATCTCGAG
GAGCAGGCGG GCGAGAACCC CCACATCCAG CTGGAACGGG TCCAGTCCGC CGAGTGGCTG
CCGCGCTGGA CCAGCGTCCT GCCGCGCATG GCGCACGGGG ATGGCCCGCC CGTGGAGGCG
GCGGGGGCGG CCGGGCCGAG CCTCATGGCG CATGTGATGG GCCAGATCGA CCGGCTGTTC
CCGAAGGGGC CCGAGCGGCG GATCGCCATG CTGCTCGCCG AGGGCTTGGA GCCGACCGGG
TGGCTCGGCA CCGATCCCGT TCAGGTTGCA GGCCAGGCCC GAGTTGCTGT GGCCGAGGTC
GAGGCGGTGC TCGCCCGCCT CCAGCGGATC GAGCCTGCGG GCCTTTTTGC CCGCAATCTT
GCGGAATGCC TGCGGCTGCA GGCTGTCGAG GCCGGGTGCC TCGATCCCGT CCTCGCCACC
ATGTTCGACC ATCTCGACCT CGTGGCGCAG GGCGCGCATG CGCGGCTCGC ACGCATGTGC
GGCACCGACG AGGCGGCCAT CCTCGCGCGC CTGCGCCTGA TCCGCAGCTT CGATCCCAAA
CCCGGCGCCC AGTTCGACCC TGGCGCCGCG CCGGTCCGCG AGCCCGACCT GATCGCCACC
CTGACCGATG CCGGCTGGGA AGTGGCGCTC AATCGCTCGG CCCTGCCATC CGTGCGGATC
CGCAAGCCGG ACAAGCGCCC CGCGACGGCC GCCGCCCGCG CCGCCTGGAC ACAGGCGCAG
GCGGTGGGGC GCATGATCGA GACCCGGAAC GCGACGCTCC TGCGCGTCGC GCGCGAGATC
CTCGCTCGGC AGGAGGCGGC ACTGGACGAG GGCCCGGCGG CGTTGGTCCC CCTCACCATG
GCCGATGTGG CCGGGGCGCT CGAGATCCAC GAGAGCACGG TGAGCCGGGT CGTTTCGGGC
ACCTGCGTGG ACACGCCCCG AGGGACCTGG TGGCTTCGGC GCATGTTCAG CGGTCGGGTG
GCCGAGGGGG GGCCTTCGGC CGCAGCGGTC CGCGCGGCGA TCTCGGAGCT TGTGGCGCAA
GAGGATGCGG CGGCTCCGCT GTCGGATGCG GCACTGGCCG AGGCGCTGGC GGCCCGGGGC
ATGCCGCTTG CCCGCAGGAC GGTCGCGAAA TACCGCGAGA TCCTGAACAT TCCGCCGGCC
CACCGCCGGC GCCGCCGGCC GGTCCGCGTC GCCTGA
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| Protein sequence | MKSRQRISIA QTQRLQLNLG LTASIRILSS DAEGLTRYLE EQAGENPHIQ LERVQSAEWL
PRWTSVLPRM AHGDGPPVEA AGAAGPSLMA HVMGQIDRLF PKGPERRIAM LLAEGLEPTG
WLGTDPVQVA GQARVAVAEV EAVLARLQRI EPAGLFARNL AECLRLQAVE AGCLDPVLAT
MFDHLDLVAQ GAHARLARMC GTDEAAILAR LRLIRSFDPK PGAQFDPGAA PVREPDLIAT
LTDAGWEVAL NRSALPSVRI RKPDKRPATA AARAAWTQAQ AVGRMIETRN ATLLRVAREI
LARQEAALDE GPAALVPLTM ADVAGALEIH ESTVSRVVSG TCVDTPRGTW WLRRMFSGRV
AEGGPSAAAV RAAISELVAQ EDAAAPLSDA ALAEALAARG MPLARRTVAK YREILNIPPA
HRRRRRPVRV A
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