| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3538 |
|---|
| Symbol | |
|---|
| ID | 5085690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 429641 |
|---|
| End bp | 430489 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640485097 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001169713 |
|---|
| Protein GI | 146279555 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.761047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCG TTGTGCTCGA TGTCGAGACG GCTAACCCGA GGATGAGCAG CATCTGCCAG
ATTGGGCTAG TGACGTTCGA GGGAGGCGTT GAGGTTGCCG CAGAGAGTCA CCTCATCGAT
CCCGAAGACC ACTTTGACCC TGTCAACGTT GCCATCCACG GGATCACCGC GGCGGCGGTC
GTGGGCGAAC CAACATTCCG GGAGGTCTAT GGACGGGTCT GCGATTTGAC GGCCGGAACT
GTAGTCGCCT GTCACACCCA TTTCGATCGC GTTGCGCTGT CCCGCGTCTG CGAGCTCCAC
GCCCTGCCGA CGCTGTCCTG TAGCTGGCTT GATACCGCGC GTGTCGCCCG GCGAGCTTGG
GTGGAGTTCT CTAAATCTGG ATACGGCCTG TCCAACCTAG CGCGTCACTT CGGCATCACG
TTTCAGCACC ATGATGCTCT TCACGACGCA CGTGCGGCTG GTCTCATCTT GGCACGGGCG
ATCGAGGAGA CCGGGCATGA TCCGTCCGAA TGGATACGTC TTTGCAACCA AGCCACCAGG
CAAGACCGTC AAACCCTCCG ACGCGACGGT GATGGGGACG GCCCGCTTGT TGGGGAAAGC
ATAGTCTTCA CGGGTGCGCT GCAGGTTCCC CGACGCGAAG CGGCGGACTT GGCTCATCAG
GCCGGGGCTG CGGTCGAGCC GAACGTTACC AAAGGTACGA CCATTCTCGT GGTCGGGGAT
CAGGACATCG ACAAGCTTGC AGGCCACGAC AAGAGCAGCA AGCATCGTAA GGCTGAGGCG
TTGATCGAGG CGGGTCAGTC TCTGAGGATC CTCGGCGAAG CTGACTTCAT GAGGGTATGT
GCCTCCTAG
|
|---|
| Protein sequence | MKFVVLDVET ANPRMSSICQ IGLVTFEGGV EVAAESHLID PEDHFDPVNV AIHGITAAAV
VGEPTFREVY GRVCDLTAGT VVACHTHFDR VALSRVCELH ALPTLSCSWL DTARVARRAW
VEFSKSGYGL SNLARHFGIT FQHHDALHDA RAAGLILARA IEETGHDPSE WIRLCNQATR
QDRQTLRRDG DGDGPLVGES IVFTGALQVP RREAADLAHQ AGAAVEPNVT KGTTILVVGD
QDIDKLAGHD KSSKHRKAEA LIEAGQSLRI LGEADFMRVC AS
|
|---|
| |