Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_3488 |
Symbol | |
ID | 5085904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009429 |
Strand | - |
Start bp | 368691 |
End bp | 369419 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640485052 |
Product | hypothetical protein |
Protein accession | YP_001169668 |
Protein GI | 146279510 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3920] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.4948 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.387521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCG GGAACGAAGG GGTCGACCGG ACGGATGCGT CCGAGGCCGA TCACAGGATC GCCAATCACC TGGCCATGCT GGCCGGCTAT GTGCGGCTGA AGATGTCGGA AGTCTCGACC GGGGCGGAGG CGCCGGACAG GGCCTGCGTC CTGCGGCTGG TCGAGGGCAT CGGCGCGCAG ATGGCGGCGG TGGCGGACCT GCACAGGATG CTCTCGACCG GCGCCTGCCT TTCCTCAAGC AACATCGGCG TCCAGATCGG CCGGATCTGC GCCGCCTTCC GCGAGGGTCC GGCCTGTGGT GCCACGATCA GCTACAGCTC GGGGCCGGGG TGCCTGCTGC CGCTGCGCCA GATCCTTCCG GTCCTGCAGA TCGTCAGCGA GGTGATGACG AACGCGCTGA AGCATGGCCA CAAGGCGGAC ATGGCCACGG CGATCCGCGT CAGCTGCCGC AAGGACAGCC GTGACCGCAT CGTGATTGCC ATCAGGGATG CAGGCGAGGG AATCGCCCCG CAGGCCGGGG CAGGGCCACC GTCCGGCATC GGGCGGCGGC TGGTCGAGAA CCTGGCCCGG CAGGTGGGCG GCACGATCCG CTACCGCTCG TCGGCGACGG GGCTGGACTT CCGCCTGTCG CTTCCCGCGC TGGTCCGGCC GACGGCCGAT CCGCGGCCGG CCGGGCCCGG CGGCGGCCCG CTTCGGGGGG CGAACCTTCA GAGCTCCCCC GGCCCGTGA
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Protein sequence | MEFGNEGVDR TDASEADHRI ANHLAMLAGY VRLKMSEVST GAEAPDRACV LRLVEGIGAQ MAAVADLHRM LSTGACLSSS NIGVQIGRIC AAFREGPACG ATISYSSGPG CLLPLRQILP VLQIVSEVMT NALKHGHKAD MATAIRVSCR KDSRDRIVIA IRDAGEGIAP QAGAGPPSGI GRRLVENLAR QVGGTIRYRS SATGLDFRLS LPALVRPTAD PRPAGPGGGP LRGANLQSSP GP
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