Gene Rsph17025_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3488 
Symbol 
ID5085904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp368691 
End bp369419 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID640485052 
Producthypothetical protein 
Protein accessionYP_001169668 
Protein GI146279510 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.4948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.387521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTCG GGAACGAAGG GGTCGACCGG ACGGATGCGT CCGAGGCCGA TCACAGGATC 
GCCAATCACC TGGCCATGCT GGCCGGCTAT GTGCGGCTGA AGATGTCGGA AGTCTCGACC
GGGGCGGAGG CGCCGGACAG GGCCTGCGTC CTGCGGCTGG TCGAGGGCAT CGGCGCGCAG
ATGGCGGCGG TGGCGGACCT GCACAGGATG CTCTCGACCG GCGCCTGCCT TTCCTCAAGC
AACATCGGCG TCCAGATCGG CCGGATCTGC GCCGCCTTCC GCGAGGGTCC GGCCTGTGGT
GCCACGATCA GCTACAGCTC GGGGCCGGGG TGCCTGCTGC CGCTGCGCCA GATCCTTCCG
GTCCTGCAGA TCGTCAGCGA GGTGATGACG AACGCGCTGA AGCATGGCCA CAAGGCGGAC
ATGGCCACGG CGATCCGCGT CAGCTGCCGC AAGGACAGCC GTGACCGCAT CGTGATTGCC
ATCAGGGATG CAGGCGAGGG AATCGCCCCG CAGGCCGGGG CAGGGCCACC GTCCGGCATC
GGGCGGCGGC TGGTCGAGAA CCTGGCCCGG CAGGTGGGCG GCACGATCCG CTACCGCTCG
TCGGCGACGG GGCTGGACTT CCGCCTGTCG CTTCCCGCGC TGGTCCGGCC GACGGCCGAT
CCGCGGCCGG CCGGGCCCGG CGGCGGCCCG CTTCGGGGGG CGAACCTTCA GAGCTCCCCC
GGCCCGTGA
 
Protein sequence
MEFGNEGVDR TDASEADHRI ANHLAMLAGY VRLKMSEVST GAEAPDRACV LRLVEGIGAQ 
MAAVADLHRM LSTGACLSSS NIGVQIGRIC AAFREGPACG ATISYSSGPG CLLPLRQILP
VLQIVSEVMT NALKHGHKAD MATAIRVSCR KDSRDRIVIA IRDAGEGIAP QAGAGPPSGI
GRRLVENLAR QVGGTIRYRS SATGLDFRLS LPALVRPTAD PRPAGPGGGP LRGANLQSSP
GP