| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3479 |
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| Symbol | |
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| ID | 5085895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009429 |
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| Strand | - |
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| Start bp | 357085 |
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| End bp | 360924 |
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| Gene Length | 3840 bp |
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| Protein Length | 1279 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640485043 |
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| Product | hypothetical protein |
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| Protein accession | YP_001169659 |
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| Protein GI | 146279501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase
[COG1020] Non-ribosomal peptide synthetase modules and related proteins |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase
[TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.165023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGACC TCGCCCGGCT GCACCTGATC GGTGTCGGGG GAAGCGGCAT GCTGCCTCTG
GCGCTCCTGC TGAAGCAGGC GGGCCACCCC GTCACCGGCA GCGACAATCT CTGCGCCCCC
GCGCGTCTTG CCCTTCTGGA AGCGCAGGGG ATCGCGGTCC TTTCGGGGGC CGATCCGACC
CTTGCGCGGG CCGCGGATTG TGTGGTGGCA AGCCCGGCCA TTCCCGAGAC CCATGTGGAA
CGGCGAGCGG CGCGGCGCGC TGGCATTCCC GTCAAGACCC GCGCCCGGAT GCTGGCCGAG
CTGATCGCCG ACCGTCTCAC GATCTGCGTG GCGGGCAGCC ATGGCAAATC GACGGTGACG
GCGATGCTCA TCCACATCCT GAGCGCCGCG GGAAAGGACG ATTTCGGCTA CATGTTGGGG
GCATCCTTTG CAGATCCGGG CATTGTCCCC GCGCGACTGG GCGCGCCCGA CGCGCCCTTC
GTGACGGAAG CCTGCGAAGC TCATGGCGCT CTGGCGCATT GGCTGCCCTC GCATGCCATC
CTCACCAATC TCGATGATGA TCACGCGGAT CACTATGGCG GGCCGAGCGG GTTGAGGCGC
GCCTTTTCAG CCTTCCTGTC GCGACTGCCG CCGGAGGGTC GGGCGGTGGC CTGCGGGGAC
GACCTGGATG TCGTCGATAT CCTGCGCGAG GCGCGCTGTG CGGCCCTCAC CTATGGCTTT
CGCGATGAGA ATGCCTTGCG GGCGGTTCAG GCCGGGGATG GAAGCGCCAC CGTCTTCCTG
CACGGAACTG AACTGGGGGC GCTGTCTCTG GCCGTTCCGG GGCGTCACAA CCTGCTCAAT
GCGCTGGCGG CTCTTGGAAT GGCGCTCACC CTTGGCATCG GGTTCCGGAC CGCAACCGGC
GCGTTGGCCG ACTTCCATGG GATCGCGCGG CGATTGAGCC GCATTGGCAC GGGAAGCCAG
CCGCGCATCT TCGACGACTT TGCCCATCAC CCGACCGAGA TCGCGGCCTC GATCGCCGTC
CTTCGCGAGA CGACGCAAGG GCGGCTGATC GCGATCCTTG AGCCTCAATT GCACAGCCGG
GTCTCGCGCA TGGCCTTGCG CTTCGCGCAG GCCCTGGGTG CGGCGGACCG CAGCTACATC
CTGCCGGTGG CGGCGCTCGG CGAGGCCGTG CAAGCGGGGA ACGGAGATGC CGCGCTGGCC
GATGCCTGCC GTTCCGTGGG GCTGTCCTGC CAACACGTCT CGGGCATGCC AGAGCTGCTG
TTGCGGTTGA AGGACGATCT GCAAGGCGAC GACACGCTTG TCGTCATGGC GGGAGCCAGC
GGTGCGGCCA TCGCTCCGCG GATTGCCGAG GCCCTTTCCC GACCGCCTGC GCGCATGTCT
GCACCCGCAC CGAGCGTCCT GATCGGAGAG AGGCGGCCCT TGCCGCCCGA TCTGCTGGCC
CTCGTCGCCG CGCACGCCGA CCGGCAGCCG ACGGCGCCGG CCGTTGAAAT GGGGCACCGC
CGCCTCAGCT ACGCGGATCT TGTGCTCAGA ACCGATGACC TCTCCGCAAC CCTTGCAGCA
GCCGGTGTCG GGGCCGGCGA CAGCGTAGGT GTCTGCCTTG GCCGGACGGT GGACCGTGTG
ACCGCGTTCC TCGCCATTCT TCAGCTTGGC GCCATCTTCG TGCCGCTCGA CCCGACCCTG
CCGGACGAGA GGCTGCGCAC CATGCTGGAG ACCGCCGGCG TGCGGACGGT CGTCGTGAAT
GCCGCAAGCC CTGCCTTGCC GGATACCGGC CTTCGCATCG TGAATTGCGG CCAGCTGCCG
GATCGGGACG GCCGGCCCGA GGCCTGTTGG CGACCGCAGG AATCTGCGGC GGATGCGCCG
GCCTACATGA TCTTCACCTC CGGGACGACC GGACAGCCCA AGGCGGTCGA GATCTCGCGC
GGCGCGCTTG CCAACTACGC GGTCGCGGCG GCCCGGCACT TCCAGATCAC CGCCAGCGCG
CGCGTCTCGC AGATCAGCGG CTTCGGCTTC GATGTCTCGG TGGGGGACAT GGCCATGGCG
CTGGCCGGTG GAGCCTGCCT TGTCTATCCC TCGGATTTGC AGGCGATCCC CGGCCCGCCC
GTCGGTCGCT TCATCGCGCA GGCCCGGCTG ACGCATCTCT CGCTGACGCC TTCGGCCCTG
GCGATCGTTC CGCAGGCAGA GCATCCGCAT CTGACCCATG TGATCGTTGC GGGCGAAGCA
TGCCCGCCCG CGCTGGTCGA GCGCTGGGGG AAAGGCCGCA CCTTCATCAA CGCCTATGGG
CCGACGGAAG CCACGGTCGA AGCTCTGTTC GCCATTTGCG CGCCCGGCAA GCCGGTCGCC
ATCGGACGGC CGTTCGACAA CATGGGGGCC TGCCTGATGG ATGAGACCCT CCAGCTCGCC
GCACCGGGAC AGGAGGGAGA GCTTTGCCTG TTCGGGCCGG GCCTGGCCAA CGGGTATCGG
CACCTGCCCG CGCTGACCGG GCAGCAGTTC CCGGTGGTCG ACATCCCCGG CCAGGGCACG
ACCCGCATCT ATCGCACCGG AGACCGGGCA AAGGCCGGAT CCGATGGCGC GCTCGTCTAT
CTGGGGCGCA TGGACAGCCA GTTGAAGTTC AATGGCTATC GCATCGAGGC CGGCGAGGTC
GAGGCGGCCC TTTGCCGCCT GCCCGGCGTG ATTGACGCGG CCGTCTCGCT CGCCTCCTCT
CCTCATTCGC CCGATCGTCT GATCGCCCAT GTGGTCATGA TGCCCGGCGC GCCCTTGCTC
GATCCGGTCG AGCTGCGCGC GCAACTGCTG CAGCACCTGC CGTCCTGGAT GGTCCCCTCG
GTCTTCCTTC CGGTTCCCGA GATTCCGCGC AACGCCAATG GCAAGCGTGA CCGCAGCGCG
TTGCCGGTGC CGCCCCAGGT GACGCAGCCA CCGGATGCCC GCACCACCGG CACCGCGACC
GAGGCAAAGC TCATGGCGCT GATCGACAGG GAGGCCGGGG CCAATGCCGT CGCCGGCACG
CGCGACAGCC TGCGCGATGC CGGAATAGAC TCCCTGTCGA TGGCGAACCT CTTGTTCGCG
ATCGAGGACG CCTTCGGCAT CACGCTCGAT GCCGGGTTCG AGGCCGGTTT CGATACCGTC
GAAGTCCTGG CCCTGATGGT GGATGCGCGG CTCAAGGCCC CACATGCCCC CTCGTCGCCC
GGCATCGAGG ATGCGCTGAC CGCCAGGATC ATGCCATATC TCGCGACCTG GCCAGGCCGG
CGGCTTGGCA AAGCCGGGCT GGTGCGGAGC CTGGCCGACG AGCGGCCGCG TCCGAAGCTC
TTCTGGTGCT TCCAGGCAGG CCATGAGCTT TCGCGGCTGA GCGAGAGTCT GGGCGACGCG
GCGTCCCTGT TCGGATTGCG CTCGGGACAT CTTGCCGTCG AATACAGTGC CGACACTCTC
AAGGCGCTCG GCCGGCTCTA TGCCGACGAG ATCACGGCCA TCGCCCCGAC CGGCCCCCTG
TTCCTTGGCG GGAATTGCCA GGGGGGCCTC GTGATCCGCG AAGCCGGGCT GGAACTGATG
CGTCAAGGCC GTAACGTGGC CCTGACCATC CTCATGGAGC AGGGCCGCTT CTTCCATTAT
CCGGGCACCA CCCTGCTTCT CTTCGGCGCG GGCAGCTATC TCAATCCCTA TGGTCAGATG
AATGCGCCGG AACAGGTGTT CCGCACCGCC TATCCTGCGG GCCATCATGT CGAGATCATC
CCCGGGGCGC ATGGGCACTA TTTCATGCCC GAGAATGTCG ATGCCCTCGC CGCGACGATC
CTGCGTCACC TCGACTGGCC TGCCCCCATG GGGCGGTCCG ATTTCAATCC TGCTGCATGA
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| Protein sequence | MSDLARLHLI GVGGSGMLPL ALLLKQAGHP VTGSDNLCAP ARLALLEAQG IAVLSGADPT
LARAADCVVA SPAIPETHVE RRAARRAGIP VKTRARMLAE LIADRLTICV AGSHGKSTVT
AMLIHILSAA GKDDFGYMLG ASFADPGIVP ARLGAPDAPF VTEACEAHGA LAHWLPSHAI
LTNLDDDHAD HYGGPSGLRR AFSAFLSRLP PEGRAVACGD DLDVVDILRE ARCAALTYGF
RDENALRAVQ AGDGSATVFL HGTELGALSL AVPGRHNLLN ALAALGMALT LGIGFRTATG
ALADFHGIAR RLSRIGTGSQ PRIFDDFAHH PTEIAASIAV LRETTQGRLI AILEPQLHSR
VSRMALRFAQ ALGAADRSYI LPVAALGEAV QAGNGDAALA DACRSVGLSC QHVSGMPELL
LRLKDDLQGD DTLVVMAGAS GAAIAPRIAE ALSRPPARMS APAPSVLIGE RRPLPPDLLA
LVAAHADRQP TAPAVEMGHR RLSYADLVLR TDDLSATLAA AGVGAGDSVG VCLGRTVDRV
TAFLAILQLG AIFVPLDPTL PDERLRTMLE TAGVRTVVVN AASPALPDTG LRIVNCGQLP
DRDGRPEACW RPQESAADAP AYMIFTSGTT GQPKAVEISR GALANYAVAA ARHFQITASA
RVSQISGFGF DVSVGDMAMA LAGGACLVYP SDLQAIPGPP VGRFIAQARL THLSLTPSAL
AIVPQAEHPH LTHVIVAGEA CPPALVERWG KGRTFINAYG PTEATVEALF AICAPGKPVA
IGRPFDNMGA CLMDETLQLA APGQEGELCL FGPGLANGYR HLPALTGQQF PVVDIPGQGT
TRIYRTGDRA KAGSDGALVY LGRMDSQLKF NGYRIEAGEV EAALCRLPGV IDAAVSLASS
PHSPDRLIAH VVMMPGAPLL DPVELRAQLL QHLPSWMVPS VFLPVPEIPR NANGKRDRSA
LPVPPQVTQP PDARTTGTAT EAKLMALIDR EAGANAVAGT RDSLRDAGID SLSMANLLFA
IEDAFGITLD AGFEAGFDTV EVLALMVDAR LKAPHAPSSP GIEDALTARI MPYLATWPGR
RLGKAGLVRS LADERPRPKL FWCFQAGHEL SRLSESLGDA ASLFGLRSGH LAVEYSADTL
KALGRLYADE ITAIAPTGPL FLGGNCQGGL VIREAGLELM RQGRNVALTI LMEQGRFFHY
PGTTLLLFGA GSYLNPYGQM NAPEQVFRTA YPAGHHVEII PGAHGHYFMP ENVDALAATI
LRHLDWPAPM GRSDFNPAA
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