Gene Rsph17025_3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_3398 
Symbol 
ID5086059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009429 
Strand
Start bp271946 
End bp273106 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content70% 
IMG OID640484964 
Productcell wall biosynthesis glycosyltransferase-like protein 
Protein accessionYP_001169580 
Protein GI146279422 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAC CGATCCGGCT CGGCTTCTTT CTGCCCCATT TCCGTCACGG CGGCGCCGAG 
CATGTCGTGC TGCTGCTGCT CCGGCATCTC GACCGCGGCA GGTTCCGGCC GGTGCTCATC
CTGCAGCGGG GCGAGGGCGA GTATCTGAAA CTGCTGCCGC CGGATGTCGA GGTGATCGTC
CTGCACCGGC CCCGGCCGCC CGCCTGCGGG GCGGAACTGG CGCGGGTTCT GCGCAAGGCG
CGGATCGACG TGCTCTACAG CGCGACCAAC GCCACGAACA TCTATGCGGC CGTGGCGGCG
TGGCTGGCCG GCGGCCGGAC GCGCACCATC ATCAGCGAGC ATACGCCGCT CGCCTTCAGT
CTCTCGACCG CGAAGCTGCT GGCGCTGCGC CGCTTTGGCA TTCGACGCGC CTATCCGCTG
GCCGATCTGA TGGTTGCCCC GCTGGACCGG ATCGGCGACG AGATGCGGGC CTATCTTGGC
GCCGCGGCCC CGCCGTTCCG CTGCCTCCCG AACCCGGTGG TGGGAAGGCT CGCCCCGCTG
CGGGATCAGC CCGCCACCGC CTTGCGGATC GTCAGCGTCG GGCGGCTGGC GGGCGTGAAG
CGCTTCAACC TGCTGATCGA GGCCTTTGCC GCATTTCACG CCCGGCTGCC GGCGGCAAGC
CTGACGATCT TCGGCGACGG GCCCGAGCGG GAGGGGCTTG AGCGCCTCGT GGCGCGGCTC
GGGCTTGGCT CGGCCGTGGT CCTCGCGGGC TATGTCGAGG ACGTGCCGTC CCGGTTGACC
GCGTTCGACC TGTTCGTCTG CACCTCCGAG CGCGAGGGGT TCGGCAATGC CATCGTCGAG
GCGATGGCCG CCAGCGTCCC CGTCCTGAGC GTCGACTGCC CATTCGGTCC GCGGCTTCTG
CTGCAGAACG GCCGGACCGG GCATCTGATC GCTGAAGCGG ACCCGGACTC GGTCGCCCGT
GCCATGACCG AGATCGCTGT CGATCAGCCC GCGCGGCAGC GCTATGCCCG CGCGGCGCGC
GATATCGCGG CATCCTTCAG CGTGGCCGGG GCGGTCGCGG CCCATGAACA GGTCTTCGCC
GAGGTTGCGG CCAAGACGTC GGCAATGTCG AGACAGGAAG GAGAGAGCGA TGGCGGTTAC
GATCGAAACT CGAGGGTCTG A
 
Protein sequence
MNGPIRLGFF LPHFRHGGAE HVVLLLLRHL DRGRFRPVLI LQRGEGEYLK LLPPDVEVIV 
LHRPRPPACG AELARVLRKA RIDVLYSATN ATNIYAAVAA WLAGGRTRTI ISEHTPLAFS
LSTAKLLALR RFGIRRAYPL ADLMVAPLDR IGDEMRAYLG AAAPPFRCLP NPVVGRLAPL
RDQPATALRI VSVGRLAGVK RFNLLIEAFA AFHARLPAAS LTIFGDGPER EGLERLVARL
GLGSAVVLAG YVEDVPSRLT AFDLFVCTSE REGFGNAIVE AMAASVPVLS VDCPFGPRLL
LQNGRTGHLI AEADPDSVAR AMTEIAVDQP ARQRYARAAR DIAASFSVAG AVAAHEQVFA
EVAAKTSAMS RQEGESDGGY DRNSRV