| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3356 |
|---|
| Symbol | |
|---|
| ID | 5085847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009429 |
|---|
| Strand | + |
|---|
| Start bp | 235470 |
|---|
| End bp | 236270 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640484925 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001169542 |
|---|
| Protein GI | 146279384 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.23684 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTTAT TCATTCAAAA CCGGAGCATG GCTGTCAATC CAAAGTTTGA TGTGCGATGG
CGGCGACGGC AGGAGGTGCA AGTGGCAAGA CCATCAGGCA GAACCGGGAG GATCGCGGCG
CTCGGCGAAC TCTGCCGGGC CGGAGCCATC CTGCATATCG GCGAGGCCGC ACGGCAGATC
GGCGCCTCCG AGATCACGAT CCGGCGCGAC CTGAGCGGCG GAGAGGGCGG GCTCGTCTGC
CTTGGCGGCT ACGTCATGCG CGCCGCCGAA GGGGCCGAGG GCTATTCGCT GACCAAGGCC
GAAGCCTCGG AGGCCGACGC CAAGGAGGCG CTGGCCGGAC GCGCGGCCGC GCTGATCGAG
CCGGGCGACA CGATCTTCCT CGATTGCGGC ACGACCACGC CCCATCTCGC GGCCAAGGTG
CCGCCGAACG CGCGCGTGAC GGTGGTGACG CAGGCGCTGA ACATCGCCGA AAGGGTGGCG
CGGCTGCCAG GCGTGACGCT GATCCTGCTG GCGGGGATCT ACCACTCCGA AACGGCGAGC
TTCTCCTCGG ACGAGGCGGT GGCGATGCTC GGTCGGATCA ACATCACCAA GGGCTTCTTC
TCGGCCGCGG GCGTGCATGA GACCGAGGGC GTGACCTGCT TCCACTTCCA CGAGGTGCCG
GTGAAGCGGG CGGCCATCGC CCGGTCGCGG CAGCGGTATC TGGTCTGCGA CGGATCGAAA
TGGGGCAGGC TGCGGCCGGC CACCTACGCG CGGCTCGACG AGTTCACCGA CTGGATCGGC
GCTCCCCCCC GGGCGGCCTG A
|
|---|
| Protein sequence | MILFIQNRSM AVNPKFDVRW RRRQEVQVAR PSGRTGRIAA LGELCRAGAI LHIGEAARQI
GASEITIRRD LSGGEGGLVC LGGYVMRAAE GAEGYSLTKA EASEADAKEA LAGRAAALIE
PGDTIFLDCG TTTPHLAAKV PPNARVTVVT QALNIAERVA RLPGVTLILL AGIYHSETAS
FSSDEAVAML GRINITKGFF SAAGVHETEG VTCFHFHEVP VKRAAIARSR QRYLVCDGSK
WGRLRPATYA RLDEFTDWIG APPRAA
|
|---|
| |