| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3080 |
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| Symbol | |
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| ID | 5083167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 3150712 |
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| End bp | 3152079 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640484652 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001169269 |
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| Protein GI | 146279110 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.153672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTC TGGTGTGGTT TCGCAACGAC CTGCGGGTGA CGGATCACCC GGCGCTGGCC
CGTGCGGACG GGCATGCGCT GCCCCTCGTC ATCGTCGATC CGGCGGAATG GGCGGATCCG
GCTCGATCGG GGCGGCAATG GGCCTTTCGG GCCGAGTGCC TGCAGGACCT GCGCGAGGCG
CTTGCGGCGC TTGGCGCGCC CCTCGCCCTG CGGGTGGGCG ATCCCCTGAC CGTGCTCGAG
ACGCTCTGCC GTCTGCACCG GATCGGACGC ATTCTCTGCA TCGAGGATCT CGCCTGCCAT
GCGCTTGATC GACGGGTTCA GGCCTGGGCG GCGGCCGCGG GGGTGGAGTT CACGGCCCTC
GCACCGGGGC CCGGTGCGCC TGCAACGCTC ACTCCGCTGC CGGGGGTCGA GCCGGGGCCG
ATCCCCCCGG CCCGGGTCCT CAGGATCGCC GAGGACCGCT GTCCGCACCG CCAGCCGGGC
GGGCGGATGC AGGGACGGCT GTTGTTGCAG AGTTTCCTCG AACGGCGGGG CGAGCACTAC
CGGGACGGGC GCGACCGGCC GCTGGGGGCC GAGCGGATCT GCTCGCGCCT GTCGCCGCAT
CTCGCGACCG GCACGCTGGC GAGAGTCGAA GTGCGCGAGG CCGTGACGGC GCGGATGGAA
GAGGCCGGGC CGGATTGGAC GCGCAGTCTC GGCGCCTTTC GGGCGGCGCT TGCGCAGGCC
GATGTCGCGC GGGGGGCTGT CTGCCCCCCG GCCGCCCCGG AAGGGGCGGC TCCCCCCGAG
GATATTTTCG CCAGAATGAA GGACGGGATC GCCTCGGGAG CGGCGCGGCG GGAGGCGCTT
CGTCTGGGTG AGACCGGGCT GCCGTTTGTG GATGCGGCCG CCCGGGCCCT CTCGGCGACC
GGCTGGCTGC CGGCGCGGCT GCGCGGCCTG CTGGTCTCGG CCGCGATGCA CCATCTGCGT
CTGTGCGAGC GGACGGCGGG TGTGGTCATT GCAGCGGGCC TGACGGACCA TGCTCCCGCC
GTCCACTGGG CGCGGGTGCG GCGGGCGGCG CGTGCCCGTC CCGTGGATCC CCTGGGACTG
GCCGCGGCGC TCGACCCGGA GGGTGCCTTC ACCCGCCGCT GGCTGCCGGA GCTGGCCGAC
GTGCCCGACC TGTTCCTGCA GGCGCCCTGG CGCTGGGAAG GTGCGCGGCA GCTTCTCGGG
CGGCGCTACC CCGAGCCGCT TGTCGATCCG GCGACGGCCA TCCGCGAGGC TCGTCGCCGC
CTCGTCCTGT CCATGCCGGA TCGGCTGGAA CCGTCAGACA TGCGGGCGGT TCGAGGCACA
CGCGGGCGGC GCGGAACCGA CCCGGGGCAG CTTTATCTGG ATCTTTGA
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| Protein sequence | MNVLVWFRND LRVTDHPALA RADGHALPLV IVDPAEWADP ARSGRQWAFR AECLQDLREA
LAALGAPLAL RVGDPLTVLE TLCRLHRIGR ILCIEDLACH ALDRRVQAWA AAAGVEFTAL
APGPGAPATL TPLPGVEPGP IPPARVLRIA EDRCPHRQPG GRMQGRLLLQ SFLERRGEHY
RDGRDRPLGA ERICSRLSPH LATGTLARVE VREAVTARME EAGPDWTRSL GAFRAALAQA
DVARGAVCPP AAPEGAAPPE DIFARMKDGI ASGAARREAL RLGETGLPFV DAAARALSAT
GWLPARLRGL LVSAAMHHLR LCERTAGVVI AAGLTDHAPA VHWARVRRAA RARPVDPLGL
AAALDPEGAF TRRWLPELAD VPDLFLQAPW RWEGARQLLG RRYPEPLVDP ATAIREARRR
LVLSMPDRLE PSDMRAVRGT RGRRGTDPGQ LYLDL
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