| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_3050 |
|---|
| Symbol | |
|---|
| ID | 5084389 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 3121361 |
|---|
| End bp | 3122734 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640484621 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_001169239 |
|---|
| Protein GI | 146279080 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.46444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG CGGTGACGCG GACGGCCGGC GTGCTCGACG GGCGGATCGC GGCCTTCCTC
GCCCGAGAGA CCGCCGCCTT CGAACAGGCC CATCCGCGTT CGCGCGCGGC GCTGCAGGGC
GGCGCCTCGG GCTGGCTCGG CGGGGTTCCG ATGCACTGGA TGAAGGACTG GCCCTCGCCC
TTTCCGCTGG TGGCGGCCGA GGCTTCGGGC TCGCATCTCA TCGACCTCGA CGGGCACAGG
GTGGACGATT TCTGCCTTGG CGACACGGGC TCGATGTTCG GCCACTCGCC CCCGCCGGTC
GCGAAGGCGA TCCGCCGGCA GGCGCGGCAC GGGCTGACCT ACATGCTGCC CACCGCCGCC
GCCCTCGAGG CGGGCCGCCT TCTCAGCCGC ACCTTCGGTG AGTTCCGCTG GCAGGTGGCG
CTCAGCGCCA GCGACGCCAA CCGATTCGCG CTGCGCGTGG CCCGGGCGGT GACCGGACGG
CGCAAGGTGC TGGTCTTCAA CGGCTGCTAC CACGGGACCG TGGACGACAC GATGGTGATG
CTCGAGGGCG GGCGCACCCG GCCGCGGCCG GGCCTCGTGG GGCAGGTGGC GGATCTCGCC
TCGAAGGCCG TCGCGGTGGA GTTCAACGAC ATCGGGGCCG TCGAGGCGGC GCTGGCCACG
GGCGAGATCG CCGCGATCCT CACCGAGCCG GTGATGACCA ACTCCTGCAT GGTGCTGCCC
GAAGCGGGCT TTCACGACGC GCTCCGCACG CTCTCGCGGC GCTACGGGGC GGTGCTGATC
CTCGATGAGA CGCACACGCT TTCGTCGGGC CTCGGCGGCT ATGGACGGGT GCACAGCCTG
TCGCCGGACA TCCTCGTGGT GGGCAAGTGC GTGGCGGGCG GGATGCCCGC CGCGGTCTGG
GGCCTGACGC CGGATCTTGC CGCGCGCTTT GCCGCCTATG ACGCGGCGCG CCCCGAGGGG
CACAGCGGCA TGGGCACGAC CCTCGCGGCC AATCCGATGC AGTTCGCCTG CCTCTGCGCC
ACCCTGAGCG AGGTGATGAC CCCCGAGGCC TACGCCCGGA TGGAGAAGGG CTCGGACCGG
CTGGCCAGGG GCATCTCGGC CGTGATCTCG CGCGTCGAGG CGCCCTGGCA TGTCGTCCGG
GTCGGCGCGC GGGTCGAGTT CATCTGCGCG CCGGGCCCCC TGCGCAACGG GACCGAGGCC
GCCCGCGCCC ATCACCCGCG CCTCGAGGCC GCGGTGCATC TGGGGCTTTT GAACCGCGGC
TCGCTGATCG CACCGTTCCA CAACATGATG CTGGTGAGCC CCGTCACCCG GAACCGCCAG
ATCGACCGCC TGATCACCGC CTTTGACGCC ATCCTGACCG AGCTTTTCGC GTGA
|
|---|
| Protein sequence | MIEAVTRTAG VLDGRIAAFL ARETAAFEQA HPRSRAALQG GASGWLGGVP MHWMKDWPSP
FPLVAAEASG SHLIDLDGHR VDDFCLGDTG SMFGHSPPPV AKAIRRQARH GLTYMLPTAA
ALEAGRLLSR TFGEFRWQVA LSASDANRFA LRVARAVTGR RKVLVFNGCY HGTVDDTMVM
LEGGRTRPRP GLVGQVADLA SKAVAVEFND IGAVEAALAT GEIAAILTEP VMTNSCMVLP
EAGFHDALRT LSRRYGAVLI LDETHTLSSG LGGYGRVHSL SPDILVVGKC VAGGMPAAVW
GLTPDLAARF AAYDAARPEG HSGMGTTLAA NPMQFACLCA TLSEVMTPEA YARMEKGSDR
LARGISAVIS RVEAPWHVVR VGARVEFICA PGPLRNGTEA ARAHHPRLEA AVHLGLLNRG
SLIAPFHNMM LVSPVTRNRQ IDRLITAFDA ILTELFA
|
|---|
| |