| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2969 |
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| Symbol | |
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| ID | 5085172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 3032536 |
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| End bp | 3034221 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640484540 |
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| Product | protein of unknown function DUF894, DitE |
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| Protein accession | YP_001169160 |
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| Protein GI | 146279001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.207712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAGCCG CGCCCGCGCG CCCTACCCAT TGGGCTGCCG GCCCGACAGA AGGTTGTCCC
TTGCCCGACC GTGTCTCACC CCTCGCGCCC TTCCGCCTTC CGACCTACCG CAACCTGTGG
ATGGCGAGCA TCGTCTCGAA CTTCGGCGGG CTGGTGCAGG CCGTGGGCGC AGGCTGGATG
ATGACGGAAC TCACCCATTC CGCGGGAATG GTGGCGCTGG TGCAGGCCTC GACCACGCTG
CCGATCATGC TCTTCTCGCT GCCGTCGGGC GCCCTGGCCG ACAGCCTGAA CCGGCGGCGC
CTCATGCTGA CGGCGCAGCT GTTCATGCTG GCCGTCTCGG CGGCGCTGGC ATTTGCGGCC
TTTGCCGGGC TGCTCACGCC CTGGCTGCTG CTGACCTTCA CCTTCCTGAT CGGCGTGGGG
GTGGCGCTGC ACAATCCCTC ATGGCAGGCC TCGGTCGGAG ATATCGTCCC GCGTGCGGAC
CTGCCGTCGG CGGTCGCGCT CAACAGCATG GGCTTCAACC TGATGCGCAG CGTCGGGCCG
GCGCTGGGCG GGCTGATCGT CGCCGCCGGC GGCGCGGCCG CAGCCTTTGC AATCAATGCG
GCGAGCTACC TGCCGCTGGT CCTCGCGCTG TTCTTCTGGC GGCCGGACTA TGCGCCGCGC
CGCCTTCCGC GCGAGGCGCT GGGATCGGCC GTCGCGGCGG GTCTGCGCTA TGTCTCGATG
TCGCCGGTGC TGCTGAAGGT GCTGTTCCGG GGCTTTCTCT TCGGACTGGC CGCGGTCAGC
CTGCTTGCGC TTCTGCCCAT CGTGGCCCGC GACCTGGTGG CCGGGGGCGC CTTCACCTAC
GGGGCGCTGC TGGGCTGCTT CGGGGTGGGG GCGATCGGCG GGGCCTTTGC CGGTGCCCGC
CTGCGCGAAC GGTTCCAGAA CGAGACCATC GTGCGCGCGG GCTTCCTGCT CTTTGCGGCG
GCGCTGGTGG GGCTAGGCCT TTCGCGCGAC CTCTGGCTGT CGGGGCTGAT GCTGTTGCCG
GCCGGTGCGG CCTGGGTGCT GGCGCTGTCG CTCTTCAATG TGAGCGTGCA GTTGGCCACT
CCGCGGTGGG TCGTCGGGCG GGCCCTTGCG CTCTATCAGA CGGCGACCTT CGGCGGGATG
GCAGCGGGCA GCTTCCTCTG GGGTCAGGCC GCCGAGGCGG GCGGCGTGGC CCAGGCGCTG
TTCGGCGCCG CGGCCGTGCT GGTGGTGGGG GCGATCGTTG GCCTGCGGAT GCCGCTGCCC
GCCTTCGGGA TGGAGGATCT CGATCCGCTC GGCCGCTTTG TCGAGCCGAA GCTGCCGGTC
GATCTGAGGA CGCGGTCGGG GCCGATCATG GTGACGGTGG AATATGATGT CGCGCCGGAG
AATGTGGAGC CGTTCCTCGC CGCGATGGCC GACCGGCGCC GGATCCGCAT CCGGGACGGG
GCCCGGCAGT GGGTGCTGCT GCGGGATCTG GAACGGCCCG GGATCTGGGC CGAAAGCTAT
CATGTGGCCA CCTGGGCCGA GTATCTGCGC CACCACGAGC GGCGGACGAA GGCGGATGCC
GAGGTGACCG ACCGGCTGCT GGCGCTGCAT GAGGGGCCGG GCAAGCCGCG CGTCCGCCGG
ATGATCGAGC GCCAGACAGT GCCGCTGCAC GACGATCTGC CGCTGAAGCC CGAGGAGCTG
ACCTGA
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| Protein sequence | MPAAPARPTH WAAGPTEGCP LPDRVSPLAP FRLPTYRNLW MASIVSNFGG LVQAVGAGWM
MTELTHSAGM VALVQASTTL PIMLFSLPSG ALADSLNRRR LMLTAQLFML AVSAALAFAA
FAGLLTPWLL LTFTFLIGVG VALHNPSWQA SVGDIVPRAD LPSAVALNSM GFNLMRSVGP
ALGGLIVAAG GAAAAFAINA ASYLPLVLAL FFWRPDYAPR RLPREALGSA VAAGLRYVSM
SPVLLKVLFR GFLFGLAAVS LLALLPIVAR DLVAGGAFTY GALLGCFGVG AIGGAFAGAR
LRERFQNETI VRAGFLLFAA ALVGLGLSRD LWLSGLMLLP AGAAWVLALS LFNVSVQLAT
PRWVVGRALA LYQTATFGGM AAGSFLWGQA AEAGGVAQAL FGAAAVLVVG AIVGLRMPLP
AFGMEDLDPL GRFVEPKLPV DLRTRSGPIM VTVEYDVAPE NVEPFLAAMA DRRRIRIRDG
ARQWVLLRDL ERPGIWAESY HVATWAEYLR HHERRTKADA EVTDRLLALH EGPGKPRVRR
MIERQTVPLH DDLPLKPEEL T
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