Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2956 |
Symbol | |
ID | 5085159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 3019646 |
End bp | 3021208 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640484527 |
Product | PAS domain-containing protein |
Protein accession | YP_001169147 |
Protein GI | 146278988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0889677 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0630855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTTTG ACTGGGCACT CGCGCTCGGG CTGATCCTGA CCGCAGCAAT GGCCGCCTCT GCCGCGATCG TGCTGGCGGG CGTGCTGCAG GCTCGGTCCG GTCGGCGGAC GGGCGGGATC TTCTCCGACC CGCAGTCCGG CACGGTCTTC CTGTTCGACG GCGAGACGCT TCTGGACGCG ACGCCCGGGG CGCGGGCCAT TCTCGCCCTC TCGCCCGCCC GCGGCGGGCC GTGGCTGCGG CTGCTCGCCT ATCTCGTGCC ACGCTTTCCC GATCTCGAAT CCCGCCTTGC CACGCTGGCC GGGGACGGGC GGCTCACGCT CGCCTCGACG GGCGAGGCGG ATCCGCTCCT CCTGATGGCC GAGATGCGGG GCGGCGTGAC GCGCCTGACG CTCGACGATC CCACCGGCGC CGAGCGGCCC CGGCTGGACC ATCTGGCGCA GCGCGCGCTG GTGGAAGAGC TGGACCAGCT CCGCGCGACC GTCTCGCAGG CGCCGCTGAT GATGTGGCGC GAGAGCGGGC GGGCCGAGGT GATCTGGGCC AACGCGGCCT ATCTCCTCGA GGCGGCGAAA CGGCTCGACC CCGGCGAAGA CCTGAGCTGG CCACTCCCCC GCCTCTTCGA GCGCGCCGCC ACCGCGCAGG GCGCGCCGGG GCAGCGCCAG AAGCTCGAGA CGCAGGGCGC CGCCCGCTGG TTCGAGCTGG TGGGCTTTGC CGAGGGCGAG GGCCGGCTTC TCTTCGCGCT GCCCGCCGAT GCCGCCGTGC AGGCCGAGGC CTCGCTGCGC GACTTCATGC AGACGCTGGC CAAGACCTTC GCGCACCTGC CGATCGGGCT TGCGATCTTC GACCAGCACC GCAAGCTGGC GCTCTTCAAC CCGGCCCTGC TCGACCTCAC CAGCCTGCCG CCCGACATGC TGGCGCTGCA ACCCTCGCTC TTCTCCTTCC TCGAGGCGCT GCGCGACCGG CAGATGATCC CCGAGCCGAA GGACTATCCC AGCTGGCGCC GCCAGATCCT CGAACTGGAG AAGGCGGCCT CCAGCGGCCT TTACACCGAG ACCTGGAGCC TGCCTTCGGG CCAGACCTAC CGGGTGATCG GGCGGCCCCA CCCGAACGGG GCCCTCGCGC TGATGTTCGA GGACATCTCG ACCGAGATGA GCCGGACCCG GCGCTATCGG GCGGATCTCG AACTCGGGCA GGCCGTGGTC GATGCGATGG ACGAGGCGAT CGCCGTCTTT TCGCAGGCGG GGGAACTGGT GATGACCAAC GCGGCCTACG GCGCCCTCTG GGGGCACGAT CCGGTCGAGA CGGTGGGCAG CGGCTCGATC GTGCAACTCT GTGAGCAATG GCGCGCCCGC ACCGCCCCTT CGCCGCTCTG GTCCGAGGCC GAGCGGTTCG TGGCCGACCT CGGCAGCCGG CGCCCCTGGA GCGGCGAGGT CCGGCTGGAC GACGGCCGCC TTGTCTCCTG CCGTTTTTCG CCGCTGACGG GCGGGGCGAC GCTGGTTCTC TTCCGCATCA ACCGGCCCGA TGAGGCCACA CCCGCCGAGG CGGCCACCCT CCGCCGCGCG TGA
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Protein sequence | MEFDWALALG LILTAAMAAS AAIVLAGVLQ ARSGRRTGGI FSDPQSGTVF LFDGETLLDA TPGARAILAL SPARGGPWLR LLAYLVPRFP DLESRLATLA GDGRLTLAST GEADPLLLMA EMRGGVTRLT LDDPTGAERP RLDHLAQRAL VEELDQLRAT VSQAPLMMWR ESGRAEVIWA NAAYLLEAAK RLDPGEDLSW PLPRLFERAA TAQGAPGQRQ KLETQGAARW FELVGFAEGE GRLLFALPAD AAVQAEASLR DFMQTLAKTF AHLPIGLAIF DQHRKLALFN PALLDLTSLP PDMLALQPSL FSFLEALRDR QMIPEPKDYP SWRRQILELE KAASSGLYTE TWSLPSGQTY RVIGRPHPNG ALALMFEDIS TEMSRTRRYR ADLELGQAVV DAMDEAIAVF SQAGELVMTN AAYGALWGHD PVETVGSGSI VQLCEQWRAR TAPSPLWSEA ERFVADLGSR RPWSGEVRLD DGRLVSCRFS PLTGGATLVL FRINRPDEAT PAEAATLRRA
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