| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_2939 |
|---|
| Symbol | |
|---|
| ID | 5084539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 2997853 |
|---|
| End bp | 2999058 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640484510 |
|---|
| Product | Na+/melibiose symporter and related transporters-like protein |
|---|
| Protein accession | YP_001169130 |
|---|
| Protein GI | 146278971 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0647777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.212356 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGA GGCTTCTGCC GTGGTCGCTT CTTGCGGGGC TGATCGCGGC TGCGGGCCTG
CCGATCTACA TCCATGCGCC GAAGGTCTAT GTGGACGAAT ACGGCCTGAG CCTGGGTGCG
CTGGGCGCGG TGCTGGCCGC GCTCCGGCTG GTGGATGTGG TGCAGGATCC CGCGCTGGGA
TGGCTGGCCG AGGTGACGCG CCGACGCAGG GCCGGCATGG TGGCGGGGGC GGTGCTGCTG
CTCGCGCTGG CGATGGTGGG CCTCTTTGCC GTGACGCCGC CGGTCGCGCC GCTCCTGTGG
TTCGCGCTGA TGCTGGTCGT GCTCTTCTCG GCCTTTTCCT TTCTCACCAT CGCCTTCTAC
TCCGAAGGGG TGGGCAAGGC CGCGCGGCTG GGACCGGGCG GGCATTTGCG GCTGGCCGGC
TGGCGCGAGG CCGGGGCCTT GGCGGGCGTC TCTCTGGCGG CTGTCGCGCC GGTCGTGCTG
GGCAGCTTTG CCCTCTTTGC CTGGGGCTTT GCGGGGCTTG CGCTGGTGGC GTGGTTCGCC
ATGCGCCGTG AATGGGCGGG CCTGGCCGAG CCGCCGCGGC CCGACCTGCG GGCGGTGCTG
CGCGATCCGA TGATCCGGCG GCTTCTGCTG CTGGCGCTGG TCAATGCGGC GCCGGTGGCG
GTGACTTCGA CGCTTTTCCT CTTCTTCGTC GAAAGCCGCC TCGACGCCGC CGGCTGGGAG
GGACCGCTGC TTCTGCTGTT CTTCCTCGCC GCCGCGGCGA GCGCGCCCGG CTGGAGCCGC
GCCGCCCGCA CCCGAGGCGC GAAACCCGTG CTGCTGGCGG GCATGGCGCT GGCCGTGGCC
TCCTTCGTCT TCGCCTTCAC GCTGGGTTCG GGCGAGATCG TGGGTTTCGC GCTGATCTGC
GTGGCGTCGG GTGCGGCGCT TGGGGCCGAC ATGGTGCTGT TGCCCGCGAT CTTCGCGCGC
CATCTCGCCC GCACGGGATC GGGAGAGGCC ACGGCCTTCG GCCTCTGGTC CTTCGCCTCG
AAACTCGCGC TTGCGCTGGC GGCGGCCTCG GTCCTGCCGC TGCTGCAACT GGCCGGCTTC
ACGCCGGGCA GCACCGGGTC CGAGGGCGCG CTCCTCCTTC TGTCGGTGCT CTACGCCCTC
GTGCCCTGCG CGCTGAAGGT CTTCGCCATC CTCCTCCTGC TTGCCACCCC CATCCCGGAG
AGCTGA
|
|---|
| Protein sequence | MTARLLPWSL LAGLIAAAGL PIYIHAPKVY VDEYGLSLGA LGAVLAALRL VDVVQDPALG
WLAEVTRRRR AGMVAGAVLL LALAMVGLFA VTPPVAPLLW FALMLVVLFS AFSFLTIAFY
SEGVGKAARL GPGGHLRLAG WREAGALAGV SLAAVAPVVL GSFALFAWGF AGLALVAWFA
MRREWAGLAE PPRPDLRAVL RDPMIRRLLL LALVNAAPVA VTSTLFLFFV ESRLDAAGWE
GPLLLLFFLA AAASAPGWSR AARTRGAKPV LLAGMALAVA SFVFAFTLGS GEIVGFALIC
VASGAALGAD MVLLPAIFAR HLARTGSGEA TAFGLWSFAS KLALALAAAS VLPLLQLAGF
TPGSTGSEGA LLLLSVLYAL VPCALKVFAI LLLLATPIPE S
|
|---|
| |