Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2927 |
Symbol | |
ID | 5084527 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2984100 |
End bp | 2985797 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 640484498 |
Product | heparinase II/III family protein |
Protein accession | YP_001169118 |
Protein GI | 146278959 |
COG category | [S] Function unknown |
COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.298148 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0379947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGAGG GCAGGGTCGC GCTTCTCGAT CGGCTCGCGG TCTGGCGCGC GCGGCTCAGC CGCCCGGCGC GCCGCTTCAC GCTTCTGCCA GAGCCGGGCT GTCTCGGCCT GCCCGAGCGC GGGCGCTGGC TGGTCGCGGG CACCCACCTC GTCGAGGGGC GGCTGGTGCA GGCGCCCGGC ACGGCCCCGT GGGACCTTCC GGGGGCGGGC GCCGCCCAGC TTGCCGACGC CCATGGCTTC GGCTGGCTCG ACGATCTCGC CGGGCTGGGA GACCGCCCCG CGCGGGGCCT TGCGCGCGAC TGGACCTTCC GCTGGATTGC CCGCTTTGGC CGCGGTCGGG GCCCCGGCTG GACCCCCGCG CTCGCGGCGC ACCGGCTCGG GCGCTGGATG AGTCATGCGG CGCTGCTGGC CGAGGCCGGC GAGCGCGATC AGGCGACGCT GGCCCGCGCG GCCTCGCAGA CGCTCCGCTT CCTCGAGCGG CGCTGGACCA GCGTCTGCGG CCCCGCCCGG ATCGAGGCGC TGTCGGCGAT CCTGCGCGCG GGCCTCGTGC TCGAGGGGAT GGAGCGCCAT GTGACCGCCG CCGCCGTGGC GCTGGGGCGA GAGGCCGAGG CGCAGGTCGA TGCCCACGGC GCCGTCGCCT CGCGCAGCCC CGAGGAACTG GCCGAGCTGT TCGCCATCCT GGCCGAGGCC GAGGCGGCCC TTGTGGCAGC GGGCCGTCCG GTGGCCGAGG CCCACCGCGC GGCCATCCAC CGGATAGTGC CCGTCCTGCG CGCCCTCAGG CATTCCGACG GCGGGCTCGC CCGGTTCCAC GGCGGCGGCC GCACCGTGGC CGAGAGGGTG GAGCGCGCCC TCGCCACCGC GGCGGTGCCC GCCGTTCCCG CCGAGGGTGC GGCCATGGGC TTCCTGCGCC TCTCGGCCGG GCGGACGAGC GTGCTGGTCG ATGCGGCGGA CCCTCCGGCC GGTCCCCACG CCCATGCCTC GACGCTGGCC TTCGAGATGA GTTCGGGCCG GCGGCCGGTC GTCGTCTCCT GCGGTTCGGG CCGGGCATGG GGCACGGAAT GGCACCGGGC GGGACGCGCG ACTCCCTCGC ATTCGACGCT GGCGATCGAA GGCTTTTCCT CGTCCCGTCT CGGCCGGTCG GGCGAGGAGA TGACCGAGCG GGCCCGCGTC CTTTCCGCGC ACCGCCAGCG CGGCGCGGCG GGGACGCAGC TCAGCCTGGT CCATGCCGGA TGGGCCGAGA CGCACGGCCT GACCCACCGG CGCGAGCTGC TGCTGGCGCC CGACGGGCGC AGCCTCTCGG GCTCGGAGAC GCTCGCCGCC CTGACGCCAG CCGAGAAGAA GCGGCTCGAC GCCGTCCTCA AGTCGGCGCG CGGGCAGGGC ATTTGCCTCG CCCTGCGGTT TCACCTGCAT GCGGACGTGC GGGCGAGCCT CGAGCCCGCC GGGCTCGGCG TGGGGCTGAC GCTCGCCAGC GGCGAGCGAT GGACCTTCCG GTTCGAGGGC GCGGCGCGGC TGACGCTCGA TCCTTCGGTC TATCTCGACC GTGCCCACAT GCTCCCCCGC GCCACGAAGC AGATCGTCCT CCACGCCGTT CTTGTGGGGC ACGAGGCCCG GATCGGCTGG ACCTTGGCCA AGACAGAGGA TACTCCGCTG GCCATTCGTG ACCTGGACCG GGACGATCCC CCCGCGACCC GGCCCTGA
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Protein sequence | MSEGRVALLD RLAVWRARLS RPARRFTLLP EPGCLGLPER GRWLVAGTHL VEGRLVQAPG TAPWDLPGAG AAQLADAHGF GWLDDLAGLG DRPARGLARD WTFRWIARFG RGRGPGWTPA LAAHRLGRWM SHAALLAEAG ERDQATLARA ASQTLRFLER RWTSVCGPAR IEALSAILRA GLVLEGMERH VTAAAVALGR EAEAQVDAHG AVASRSPEEL AELFAILAEA EAALVAAGRP VAEAHRAAIH RIVPVLRALR HSDGGLARFH GGGRTVAERV ERALATAAVP AVPAEGAAMG FLRLSAGRTS VLVDAADPPA GPHAHASTLA FEMSSGRRPV VVSCGSGRAW GTEWHRAGRA TPSHSTLAIE GFSSSRLGRS GEEMTERARV LSAHRQRGAA GTQLSLVHAG WAETHGLTHR RELLLAPDGR SLSGSETLAA LTPAEKKRLD AVLKSARGQG ICLALRFHLH ADVRASLEPA GLGVGLTLAS GERWTFRFEG AARLTLDPSV YLDRAHMLPR ATKQIVLHAV LVGHEARIGW TLAKTEDTPL AIRDLDRDDP PATRP
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