Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_2907 |
Symbol | |
ID | 5083255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 2964812 |
End bp | 2965264 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640484477 |
Product | putative GAF sensor protein |
Protein accession | YP_001169098 |
Protein GI | 146278939 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1956] GAF domain-containing protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.261788 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTACG ACCGGCTCGA CCAGACCATC GACGCGCTCT GCCACGGCGA GCGTGATACG GTCGCGCTGA TGGCAACCGT CGCCTGCGAG CTGCACCATG CGCACCCGCT GTCGGACTGG ACGGGCTTCT ACCGCGTGAC CGAGCCCGAG GTGCTGAAGA TCGGGCCCTA CCAGGGATCG CACGGCTGCC TCGTGATCCC CTTCGCGCGG GGCGTCTGCG GGGCGGCGGC GCGCACGGGC GAGATCCAGC TCGTCCCGGA CGTGGAGGCC TTTCCCGACC ATATCGCCTG CTCGTCCTCC ACCCGCTCCG AGATCGTTCT GCCGGTCCGC AACGGCGAGG GCCGGCTGCT GGGGGTGCTC GACCTCGACA GCAACACGCC GGCGGCCTTC ACCGAAGAGG ACGCGCGGCG GCTTCAGGCG CTGCTCGACC GCACGTTCCG GGAGGCGTCG TGA
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Protein sequence | MDYDRLDQTI DALCHGERDT VALMATVACE LHHAHPLSDW TGFYRVTEPE VLKIGPYQGS HGCLVIPFAR GVCGAAARTG EIQLVPDVEA FPDHIACSSS TRSEIVLPVR NGEGRLLGVL DLDSNTPAAF TEEDARRLQA LLDRTFREAS
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